RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1031674" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA1031674 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27224585 27224585 PRJNA1031674_P_NODE_13643_length_281_cov_2.192308_g13432_i0 PRJNA1031674 13643 281 2.192308 6.16038548 Nigrospora oryzae umbra-like virus 1 3234285 Viruses Viruses 65.1 7.87e-10   NR XCW89614.1 3234285 g13432 i0 67.4 0.491103202846975 46 15 49.1 0 280 143 449 494 XCW89614.1 RNA-dependent RNA polymerase [Nigrospora oryzae umbra-like virus 1] diamond 138 65.1 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Nigrospora oryzae umbra-like virus 1
28298370 28298370 PRJNA1031674_P_NODE_3226_length_440_cov_1.534060_g3016_i0 PRJNA1031674 3226 440 1.53406 6.749864 Malassezia restricta virus MrV4 76775 Viruses Viruses 120 7.64e-32   NR QJA42333.1 2727864 g3016 i0 72.4 0.518181818181818 76 21 51.8 0 368 141 49 124 QJA42333.1 hypothetical protein MRV40S_001 [Malassezia restricta virus MrV40S] diamond 228 120 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40S
32248392 32248392 PRJNA1031674_P_NODE_13878_length_281_cov_1.110577_g13667_i0 PRJNA1031674 13878 281 1.110577 3.12072137 Grapevine endophyte alphaendornavirus 1249676 Viruses Viruses 188 5.33e-53   NR YP_007003829.1 1249676 g13667 i0 92.5 0.99288256227758 93 7 99.3 0 280 2 62 154 YP_007003829.1 polyprotein [Grapevine endophyte alphaendornavirus] diamond 279 188 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Alphaendornavirus vitis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;