RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1028258" and tax_phylum = "Candidatus Tectimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Tectimicrobiota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1028258 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31077907 31077907 PRJNA1028258_P_NODE_78035_length_292_cov_0.905830_g77472_i0 PRJNA1028258 78035 292 0.90583 2.6450236 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 44.3 0.0172   NR HEY5871429.1 2528274 g77472 i0 38.2 0.780821917808219 76 41 78.1 3 2 229 30 99 HEY5871429.1 class I SAM-dependent methyltransferase [Candidatus Tectimicrobiota bacterium] diamond 228 44.3 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium
31203620 31203620 PRJNA1028258_P_NODE_147275_length_232_cov_0.871166_g146712_i0 PRJNA1028258 147275 232 0.871166 2.02110512 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 86.3 1.31e-19   NR HSF29306.1 2528274 g146712 i0 52.6 0.982758620689655 76 33 97 2 227 3 8 81 HSF29306.1 Mth938-like domain-containing protein [Candidatus Tectimicrobiota bacterium] diamond 228 86.3 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium
32176975 32176975 PRJNA1028258_P_NODE_101338_length_260_cov_0.952880_g100775_i0 PRJNA1028258 101338 260 0.95288 2.477488 Nitrospinota/Tectimicrobiota group 1802340 Bacteria Bacteria 43.1 0.0254   NR WP_089942464.1 93172 g100775 i0 36 1.15384615384615 50 30 57.7 1 192 43 100 147 WP_089942464.1 NIPSNAP family protein [Candidatus Entotheonella palauensis] diamond 300 43.1 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella Candidatus Entotheonella palauensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;