RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1028258" and tax_phylum = "Candidatus Bathyarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Bathyarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1028258 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28424841 28424841 PRJNA1028258_P_NODE_60906_length_327_cov_1.100775_g60343_i0 PRJNA1028258 60906 327 1.100775 3.59953425 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 48.9 6.59e-4   NR HKZ93440.1 3045160 g60343 i0 28.7 1.11926605504587 122 65 96.3 4 8 322 355 471 HKZ93440.1 multicopper oxidase domain-containing protein [Candidatus Bathyarchaeia archaeon] diamond 366 48.9 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
30666966 30666966 PRJNA1028258_P_NODE_3873_length_1182_cov_2.791554_g3596_i0 PRJNA1028258 3873 1182 2.791554 32.99616828 Candidatus Bathyarchaeum sp. 3072974 Archaea Archaea 181 2.7e-47   NR UCC58209.1 3072974 g3596 i0 37 2.70812182741117 346 173 77.2 9 912 1 83 425 UCC58209.1 MAG: beta-propeller domain-containing protein [Candidatus Bathyarchaeum sp.] diamond 3201 181 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia Candidatus Bathyarchaeales Candidatus Bathyarchaeaceae Candidatus Bathyarchaeum Candidatus Bathyarchaeum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;