RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1028258" and tax_clade = "Pithoviruses"

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tax_superkingdom 1

tax_clade 1

  • Pithoviruses · 3 ✖

bioproject 1

  • PRJNA1028258 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27603975 27603975 PRJNA1028258_P_NODE_149804_length_231_cov_0.876543_g149241_i0 PRJNA1028258 149804 231 0.876543 2.02481433 Solumvirus sp. 2487773 Viruses Viruses 95.9 2.35e-22   NR AYV86227.1 2487773 g149241 i0 69.1 0.883116883116883 68 21 88.3 0 204 1 41 108 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 204 95.9 1 Viruses Pithoviruses             Solumvirus sp.
27856309 27856309 PRJNA1028258_P_NODE_42885_length_386_cov_2.198738_g42322_i0 PRJNA1028258 42885 386 2.198738 8.48712868 Solumvirus sp. 2487773 Viruses Viruses 187 2.18e-57   NR AYV86227.1 2487773 g42322 i0 68.8 0.994818652849741 128 40 99.5 0 384 1 49 176 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 384 187 1 Viruses Pithoviruses             Solumvirus sp.
30730131 30730131 PRJNA1028258_P_NODE_168054_length_227_cov_0.898734_g167491_i0 PRJNA1028258 168054 227 0.898734 2.04012618 Pithovirus LCPAC4 2506597 Viruses Viruses 116 7.92e-30   NR QBK93439.1 2506597 g167491 i0 65.3 0.991189427312775 75 26 99.1 0 1 225 168 242 QBK93439.1 MAG: 2OG-Fe(II) oxygenase superfamily protein [Pithovirus LCPAC404] diamond 225 116 1 Viruses Pithoviruses             Pithovirus LCPAC404

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;