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contig_metadata

66 rows where analysis = "diamond", bioproject = "PRJNA1025141" and tax_phylum = "Pseudomonadota"

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tax_superkingdom 1

tax_phylum 1

  • Pseudomonadota · 66 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1025141 · 66 ✖

analysis 1

  • diamond · 66 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
162762 162762 PRJNA1025141_P_NODE_281_length_1330_cov_1.502784_g257_i0 PRJNA1025141 281 1330 1.502784 19.9870272 Pseudomonadati 3379134 Bacteria Bacteria 495 5.929999999999999e-171   NR WP_028466775.1 390877 g257 i0 62.5 65.0977443609023 395 141 89.1 4 1251 67 6 393 WP_028466775.1 elongation factor Tu [Nisaea denitrificans] diamond 86580 500 0.99 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodospirillales Thalassobaculaceae Nisaea Nisaea denitrificans
1004175 1004175 PRJNA1025141_P_NODE_5321_length_349_cov_1.268116_g5260_i0 PRJNA1025141 5321 349 1.268116 4.42572484 Pseudomonadota bacterium 1977087 Bacteria Bacteria 173 1.22e-52   NR MEL6702540.1 1977087 g5260 i0 71.9 0.979942693409742 114 32 98 0 8 349 4 117 MEL6702540.1 50S ribosomal protein L5 [Pseudomonadota bacterium] diamond 342 173 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
1437491 1437491 PRJNA1025141_P_NODE_12682_length_242_cov_0.911243_g12621_i0 PRJNA1025141 12682 242 0.911243 2.20520806 Alphaproteobacteria bacterium 1913988 Bacteria Bacteria 110 2.27e-27   NR MEA3074549.1 1913988 g12621 i0 67.5 0.991735537190083 80 25 99.2 1 242 3 39 117 MEA3074549.1 hypothetical protein [Alphaproteobacteria bacterium] diamond 240 110 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria       Alphaproteobacteria bacterium
5265620 5265620 PRJNA1025141_P_NODE_3305_length_450_cov_1.119363_g3244_i0 PRJNA1025141 3305 450 1.119363 5.0371335 Aquariibacter albus 2759899 Bacteria Bacteria 273 5.3699999999999996e-89   NR WP_182663565.1 2759899 g3244 i0 98 1 150 3 100 0 450 1 111 260 WP_182663565.1 substrate-binding domain-containing protein [Aquariibacter albus] diamond 450 273 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Aquariibacter Aquariibacter albus
5265630 5265630 PRJNA1025141_P_NODE_4145_length_399_cov_1.395706_g4084_i0 PRJNA1025141 4145 399 1.395706 5.56886694 Ketobacter sp. 2083498 Bacteria Bacteria 145 9.26e-38   NR MCP5019832.1 2083498 g4084 i0 63.7 1.75187969924812 102 37 76.7 0 397 92 567 668 MCP5019832.1 HAD-IC family P-type ATPase [Ketobacter sp.] diamond 699 145 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Ketobacteraceae Ketobacter Ketobacter sp.
5265658 5265658 PRJNA1025141_P_NODE_5905_length_330_cov_1.116732_g5844_i0 PRJNA1025141 5905 330 1.116732 3.6852156 Aquariibacter albus 2759899 Bacteria Bacteria 216 8.52e-63   NR WP_182663368.1 2759899 g5844 i0 99.1 0.990909090909091 109 1 99.1 0 2 328 843 951 WP_182663368.1 formate dehydrogenase subunit alpha [Aquariibacter albus] diamond 327 216 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Aquariibacter Aquariibacter albus
16739780 16739780 PRJNA1025141_P_NODE_6294_length_319_cov_0.918699_g6233_i0 PRJNA1025141 6294 319 0.918699 2.93064981 root 1 Root_unresolved Root_unresolved 162 1.5599999999999994e-48   NR WP_161976917.1 2371 g6233 i0 100 1.39184952978056 74 0 69.6 0 317 96 31 104 WP_161976917.1 DDE-type integrase/transposase/recombinase, partial [Xylella fastidiosa] diamond 444 162 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Xylella Xylella fastidiosa
18014650 18014650 PRJNA1025141_P_NODE_275_length_1339_cov_2.782780_g251_i0 PRJNA1025141 275 1339 2.78278 37.2614242 Colwellia sp. 56799 Bacteria Bacteria 351 3.46e-113   NR MCP4990241.1 56799 g251 i0 41.1 0.997012696041822 445 258 99.3 4 1 1329 5 447 MCP4990241.1 protein disulfide-isomerase [Colwellia sp.] diamond 1335 351 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Alteromonadales Colwelliaceae Colwellia Colwellia sp.
18014730 18014730 PRJNA1025141_P_NODE_8615_length_265_cov_1.598958_g8554_i0 PRJNA1025141 8615 265 1.598958 4.2372387 Alphaproteobacteria bacterium 1913988 Bacteria Bacteria 124 7.949999999999999e-32   NR MDH3234361.1 1913988 g8554 i0 70.5 11.9547169811321 88 26 99.6 0 264 1 78 165 MDH3234361.1 acyl-CoA carboxylase subunit beta [Alphaproteobacteria bacterium] diamond 3168 124 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria       Alphaproteobacteria bacterium
18014741 18014741 PRJNA1025141_P_NODE_915_length_857_cov_2.862245_g867_i0 PRJNA1025141 915 857 2.862245 24.52943965 Endozoicomonas 305899 Bacteria Bacteria 217 4.7400000000000005e-64   NR WP_066014747.1 1333660 g867 i0 47.3 3.54609101516919 237 117 80.2 3 160 846 71 307 WP_066014747.1 pepsin-like aspartyl protease [Endozoicomonas atrinae] diamond 3039 218 0.995412844036697 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Oceanospirillales Endozoicomonadaceae Endozoicomonas Endozoicomonas atrinae
19288557 19288557 PRJNA1025141_P_NODE_7056_length_299_cov_1.676991_g6995_i0 PRJNA1025141 7056 299 1.676991 5.01420309 Pseudomonadati 3379134 Bacteria Bacteria 135 6.19e-35   NR HYG90020.1 34012 g6995 i0 68.7 63.5719063545151 99 31 99.3 0 299 3 279 377 HYG90020.1 chaperonin GroEL [Azospirillum sp.] diamond 19008 136 0.992647058823529 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodospirillales Azospirillaceae Azospirillum Azospirillum sp.
21839744 21839744 PRJNA1025141_P_NODE_7598_length_286_cov_1.309859_g7537_i0 PRJNA1025141 7598 286 1.309859 3.74619674 Aquariibacter albus 2759899 Bacteria Bacteria 135 2.52e-35   NR WP_182664407.1 2759899 g7537 i0 98.9 0.996503496503496 95 1 99.7 0 1 285 57 151 WP_182664407.1 efflux RND transporter periplasmic adaptor subunit [Aquariibacter albus] diamond 285 135 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Aquariibacter Aquariibacter albus
24388897 24388897 PRJNA1025141_P_NODE_4960_length_364_cov_0.934708_g4899_i0 PRJNA1025141 4960 364 0.934708 3.40233712 Sphaerotilus sp. 2093942 Bacteria Bacteria 162 1.4e-48   NR WP_416222158.1 2093942 g4899 i0 83 0.774725274725275 94 16 77.5 0 81 362 2 95 WP_416222158.1 ferric iron uptake transcriptional regulator [Sphaerotilus sp.] diamond 282 162 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Sphaerotilus Sphaerotilus sp.
25230380 25230380 PRJNA1025141_P_NODE_13180_length_241_cov_0.916667_g13119_i0 PRJNA1025141 13180 241 0.916667 2.20916747 Pseudomonadota bacterium 1977087 Bacteria Bacteria 82.8 1.25e-18   NR MEL6702614.1 1977087 g13119 i0 49.3 0.908713692946058 73 37 90.9 0 7 225 8 80 MEL6702614.1 hypothetical protein [Pseudomonadota bacterium] diamond 219 82.8 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
26615434 26615434 PRJNA1025141_P_NODE_12361_length_243_cov_0.905882_g12300_i0 PRJNA1025141 12361 243 0.905882 2.20129326 Bacteria 2 Bacteria Bacteria 99 3.23e-23   NR MBT8047033.1 1913989 g12300 i0 51.3 4.9382716049382704 80 38 98.8 1 2 241 46 124 MBT8047033.1 phytanoyl-CoA dioxygenase family protein [Gammaproteobacteria bacterium] diamond 1200 100 0.99 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria       Gammaproteobacteria bacterium
26623393 26623393 PRJNA1025141_P_NODE_8921_length_259_cov_1.500000_g8860_i0 PRJNA1025141 8921 259 1.5 3.885 Ketobacter sp. 2083498 Bacteria Bacteria 92.8 1.11e-19   NR MCP5019832.1 2083498 g8860 i0 55.8 0.996138996138996 86 38 99.6 0 1 258 170 255 MCP5019832.1 HAD-IC family P-type ATPase [Ketobacter sp.] diamond 258 92.8 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Ketobacteraceae Ketobacter Ketobacter sp.
26678680 26678680 PRJNA1025141_P_NODE_21_length_2978_cov_2.371773_g19_i0 PRJNA1025141 21 2978 2.371773 70.63139994 Pseudomonadati 3379134 Bacteria Bacteria 106 4.92e-19   NR QYZ65326.1 2496632 g19 i0 27.2 1.51712558764271 508 309 49.9 22 1220 2704 3441 3900 QYZ65326.1 MAG: PKD domain-containing protein [Gammaproteobacteria bacterium (ex Lamellibrachia satsuma)] diamond 4518 106 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria       Gammaproteobacteria bacterium (ex Lamellibrachia satsuma)
26686697 26686697 PRJNA1025141_P_NODE_6841_length_305_cov_0.922414_g6780_i0 PRJNA1025141 6841 305 0.922414 2.8133627 Marinobacter similis 1420916 Bacteria Bacteria 58.2 2.88e-7   NR WP_094191139.1 1420916 g6780 i0 39.4 1.67213114754098 104 44 99.3 4 1 303 174 261 WP_094191139.1 M28 family peptidase [Marinobacter similis] diamond 510 58.2 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Marinobacteraceae Marinobacter Marinobacter similis
26749689 26749689 PRJNA1025141_P_NODE_10321_length_249_cov_0.875000_g10260_i0 PRJNA1025141 10321 249 0.875 2.17875 Xylella fastidiosa 2371 Bacteria Bacteria 102 1.97e-26   NR WP_140162420.1 2371 g10260 i0 97.9 0.578313253012048 48 1 57.8 0 145 2 1 48 WP_140162420.1 hypothetical protein [Xylella fastidiosa] diamond 144 102 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Xylella Xylella fastidiosa
26908451 26908451 PRJNA1025141_P_NODE_12002_length_244_cov_0.900585_g11941_i0 PRJNA1025141 12002 244 0.900585 2.1974274 Gammaproteobacteria bacterium 1913989 Bacteria Bacteria 43.5 0.0198   NR NCX93155.1 1913989 g11941 i0 44.2 0.639344262295082 52 28 62.7 1 64 216 247 298 NCX93155.1 hypothetical protein [Gammaproteobacteria bacterium] diamond 156 43.5 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria       Gammaproteobacteria bacterium
26908459 26908459 PRJNA1025141_P_NODE_8602_length_266_cov_0.886010_g8541_i0 PRJNA1025141 8602 266 0.88601 2.3567866 Pseudomonadota bacterium 1977087 Bacteria Bacteria 47.8 8.45e-4   NR MBO5753213.1 1977087 g8541 i0 55 0.451127819548872 40 16 45.1 1 6 125 119 156 MBO5753213.1 choice-of-anchor L domain-containing protein [Pseudomonadota bacterium] diamond 120 47.8 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
27161134 27161134 PRJNA1025141_P_NODE_10442_length_248_cov_0.897143_g10381_i0 PRJNA1025141 10442 248 0.897143 2.22491464 Aquariibacter albus 2759899 Bacteria Bacteria 123 3.66e-34   NR WP_182663232.1 2759899 g10381 i0 100 0.762096774193548 63 0 76.2 0 60 248 1 63 WP_182663232.1 ribonuclease domain-containing protein [Aquariibacter albus] diamond 189 123 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Aquariibacter Aquariibacter albus
27192914 27192914 PRJNA1025141_P_NODE_3262_length_453_cov_1.418421_g3201_i0 PRJNA1025141 3262 453 1.418421 6.42544713 Alphaproteobacteria bacterium 1913988 Bacteria Bacteria 58.9 7.49e-7   NR MCQ2913906.1 1913988 g3201 i0 34.8 0.741721854304636 112 59 73.5 8 59 391 523 621 MCQ2913906.1 hypothetical protein [Alphaproteobacteria bacterium] diamond 336 58.9 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria       Alphaproteobacteria bacterium
27224469 27224469 PRJNA1025141_P_NODE_12043_length_244_cov_0.900585_g11982_i0 PRJNA1025141 12043 244 0.900585 2.1974274 Hyphomicrobiales bacterium 1909294 Bacteria Bacteria 167 2.5299999999999998e-48   NR PZO02462.1 1909294 g11982 i0 98.8 0.995901639344262 81 1 99.6 0 2 244 244 324 PZO02462.1 MAG: hypothetical protein DCF30_05380 [Hyphomicrobiales bacterium] diamond 243 167 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales     Hyphomicrobiales bacterium
27382777 27382777 PRJNA1025141_P_NODE_10643_length_248_cov_0.880000_g10582_i0 PRJNA1025141 10643 248 0.88 2.1824 Alphaproteobacteria bacterium 1913988 Bacteria Bacteria 62.8 3.31e-9   NR HEY7609781.1 1913988 g10582 i0 63.5 0.762096774193548 63 23 76.2 0 191 3 169 231 HEY7609781.1 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase [Alphaproteobacteria bacterium] diamond 189 62.8 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria       Alphaproteobacteria bacterium
27722561 27722561 PRJNA1025141_P_NODE_3364_length_445_cov_2.182796_g3303_i0 PRJNA1025141 3364 445 2.182796 9.7134422 Pseudomonadati 3379134 Bacteria Bacteria 80.5 2.11e-14   NR MEM7259508.1 1977087 g3303 i0 31.7 1.96179775280899 145 87 92.4 3 31 441 359 499 MEM7259508.1 kelch repeat-containing protein [Pseudomonadota bacterium] diamond 873 80.5 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
27761846 27761846 PRJNA1025141_P_NODE_10184_length_249_cov_0.875000_g10123_i0 PRJNA1025141 10184 249 0.875 2.17875 Acidovorax sp. 1872122 Bacteria Bacteria 48.5 3.65e-4   NR WP_409954748.1 1872122 g10123 i0 39.1 0.771084337349398 64 38 77.1 1 58 249 71 133 WP_409954748.1 hypothetical protein [Acidovorax sp.] diamond 192 48.5 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax sp.
27785511 27785511 PRJNA1025141_P_NODE_3404_length_443_cov_1.270270_g3343_i0 PRJNA1025141 3404 443 1.27027 5.6272961 Pseudomonadati 3379134 Bacteria Bacteria 110 6.55e-26   NR WP_372702318.1 1955812 g3343 i0 42.5 2.97968397291196 146 77 96.8 3 443 15 98 239 WP_372702318.1 phosphate ABC transporter substrate-binding protein PstS [Castellaniella sp.] diamond 1320 110 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Castellaniella Castellaniella sp.
27974719 27974719 PRJNA1025141_P_NODE_4785_length_371_cov_1.338926_g4724_i0 PRJNA1025141 4785 371 1.338926 4.96741546 Pseudomonadati 3379134 Bacteria Bacteria 109 4.34e-25   NR WP_029920849.1 418856 g4724 i0 47 8.66037735849057 117 61 94.6 1 3 353 280 395 WP_029920849.1 M20 family metallopeptidase [Nevskia soli] diamond 3213 110 0.990909090909091 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Nevskiales Nevskiaceae Nevskia Nevskia soli
28014381 28014381 PRJNA1025141_P_NODE_3445_length_440_cov_1.302452_g3384_i0 PRJNA1025141 3445 440 1.302452 5.7307888 Pseudomonadota bacterium 1977087 Bacteria Bacteria 91.7 1.65e-18   NR MEL7400660.1 1977087 g3384 i0 41 0.947727272727273 139 74 90 3 2 397 45 182 MEL7400660.1 hypothetical protein [Pseudomonadota bacterium] diamond 417 91.7 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
28108738 28108738 PRJNA1025141_P_NODE_5245_length_352_cov_1.379928_g5184_i0 PRJNA1025141 5245 352 1.379928 4.85734656 Burkholderiaceae bacterium 2030806 Bacteria Bacteria 73.9 9.14e-13   NR MET0506780.1 2030806 g5184 i0 75 0.886363636363636 52 13 44.3 0 156 1 31 82 MET0506780.1 malate dehydrogenase [Burkholderiaceae bacterium] diamond 312 73.9 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae   Burkholderiaceae bacterium
28172011 28172011 PRJNA1025141_P_NODE_6746_length_307_cov_1.316239_g6685_i0 PRJNA1025141 6746 307 1.316239 4.04085373 Alphaproteobacteria bacterium 1913988 Bacteria Bacteria 43.9 0.0298   NR MBV8738259.1 1913988 g6685 i0 39.4 0.693811074918567 71 42 68.4 1 294 85 20 90 MBV8738259.1 DUF2029 domain-containing protein [Alphaproteobacteria bacterium] diamond 213 43.9 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria       Alphaproteobacteria bacterium
28195560 28195560 PRJNA1025141_P_NODE_8066_length_277_cov_0.779412_g8005_i0 PRJNA1025141 8066 277 0.779412 2.15897124 Bacteria 2 Bacteria Bacteria 46.6 0.00245   NR WP_151034567.1 2303332 g8005 i0 61.8 2.5884476534296 34 13 36.8 0 2 103 507 540 WP_151034567.1 chaperonin GroEL [Cellvibrio sp. KY-GH-1] diamond 717 46.6 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Cellvibrionales Cellvibrionaceae Cellvibrio Cellvibrio sp. KY-GH-1
28890272 28890272 PRJNA1025141_P_NODE_6068_length_325_cov_1.218254_g6007_i0 PRJNA1025141 6068 325 1.218254 3.9593255 Bacteria 2 Bacteria Bacteria 48.1 0.00118   NR NCF30246.1 1913989 g6007 i0 40.7 2.64 59 35 54.5 0 320 144 149 207 NCF30246.1 hypothetical protein [Gammaproteobacteria bacterium] diamond 858 48.1 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria       Gammaproteobacteria bacterium
28929844 28929844 PRJNA1025141_P_NODE_11448_length_245_cov_1.343023_g11387_i0 PRJNA1025141 11448 245 1.343023 3.29040635 Pseudomonadota bacterium 1977087 Bacteria Bacteria 127 3.93e-33   NR MES2932922.1 1977087 g11387 i0 78.2 0.955102040816327 78 16 95.5 1 234 1 1 77 MES2932922.1 TIGR03118 family protein [Pseudomonadota bacterium] diamond 234 127 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
28961637 28961637 PRJNA1025141_P_NODE_5928_length_329_cov_1.203125_g5867_i0 PRJNA1025141 5928 329 1.203125 3.95828125 Reyranella sp. 1929291 Bacteria Bacteria 44.7 0.00757   NR HZP98787.1 1929291 g5867 i0 32.7 0.893617021276596 98 54 81.2 3 283 17 2 96 HZP98787.1 arsenate reductase ArsC [Reyranella sp.] diamond 294 44.7 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Reyranellaceae Reyranella Reyranella sp.
29056244 29056244 PRJNA1025141_P_NODE_12428_length_243_cov_0.905882_g12367_i0 PRJNA1025141 12428 243 0.905882 2.20129326 Methylorubrum 2282523 Bacteria Bacteria 103 1.9e-23   NR WP_141950622.1 2282523 g12367 i0 60.8 0.975308641975309 79 31 97.5 0 241 5 123 201 WP_141950622.1 MULTISPECIES: AMP-binding protein [Methylorubrum] diamond 237 103 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum  
29087837 29087837 PRJNA1025141_P_NODE_10008_length_250_cov_0.870056_g9947_i0 PRJNA1025141 10008 250 0.870056 2.17514 Ketobacter sp. 2083498 Bacteria Bacteria 87.4 1.06e-18   NR MCP5019833.1 2083498 g9947 i0 53.7 0.984 82 37 98.4 1 3 248 130 210 MCP5019833.1 cation-translocating P-type ATPase [Ketobacter sp.] diamond 246 87.4 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Ketobacteraceae Ketobacter Ketobacter sp.
29119505 29119505 PRJNA1025141_P_NODE_10909_length_247_cov_0.885057_g10848_i0 PRJNA1025141 10909 247 0.885057 2.18609079 Xylella fastidiosa 2371 Bacteria Bacteria 41.2 0.019   NR WP_222927393.1 2371 g10848 i0 66.7 0.437246963562753 36 12 43.7 0 90 197 15 50 WP_222927393.1 hypothetical protein, partial [Xylella fastidiosa] diamond 108 41.2 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Xylella Xylella fastidiosa
29182589 29182589 PRJNA1025141_P_NODE_12929_length_241_cov_0.916667_g12868_i0 PRJNA1025141 12929 241 0.916667 2.20916747 Aquabacterium sp. 1872578 Bacteria Bacteria 57 3.03e-8   NR WP_294638290.1 1872578 g12868 i0 50 0.796680497925311 64 32 79.7 0 42 233 1 64 WP_294638290.1 H-NS histone family protein [Aquabacterium sp.] diamond 192 57 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Aquabacterium Aquabacterium sp.
29466203 29466203 PRJNA1025141_P_NODE_11470_length_245_cov_1.232558_g11409_i0 PRJNA1025141 11470 245 1.232558 3.0197671 Escherichia coli 562 Bacteria Bacteria 42.7 0.0321   NR EKI3097563.1 562 g11409 i0 38.2 0.930612244897959 76 35 84.5 4 219 13 44 114 EKI3097563.1 hypothetical protein [Escherichia coli] diamond 228 42.7 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
29466211 29466211 PRJNA1025141_P_NODE_6250_length_320_cov_1.182186_g6189_i0 PRJNA1025141 6250 320 1.182186 3.7829952 Colwellia sp. 56799 Bacteria Bacteria 90.9 9.84e-19   NR MCP4990241.1 56799 g6189 i0 48.1 3.421875 106 52 99.4 2 3 320 64 166 MCP4990241.1 protein disulfide-isomerase [Colwellia sp.] diamond 1095 90.9 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Alteromonadales Colwelliaceae Colwellia Colwellia sp.
29521815 29521815 PRJNA1025141_P_NODE_5830_length_332_cov_1.366795_g5769_i0 PRJNA1025141 5830 332 1.366795 4.5377594 Luteimonas 83614 Bacteria Bacteria 60.1 1.77e-8   NR WP_096298457.1 83614 g5769 i0 42.3 3.02710843373494 71 41 64.2 0 230 18 21 91 WP_096298457.1 MULTISPECIES: Hsp20/alpha crystallin family protein [Luteimonas] diamond 1005 60.1 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Luteimonas  
29529801 29529801 PRJNA1025141_P_NODE_4610_length_378_cov_1.275410_g4549_i0 PRJNA1025141 4610 378 1.27541 4.8210498 Escherichia coli 562 Bacteria Bacteria 116 1.77e-30   NR WP_210434107.1 562 g4549 i0 46.9 0.896825396825397 113 60 89.7 0 40 378 2 114 WP_210434107.1 ATP-grasp domain-containing protein, partial [Escherichia coli] diamond 339 116 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
29529803 29529803 PRJNA1025141_P_NODE_7170_length_296_cov_1.726457_g7109_i0 PRJNA1025141 7170 296 1.726457 5.11031272 Klebsiella pneumoniae 573 Bacteria Bacteria 157 5.109999999999999e-48   NR WP_336505994.1 573 g7109 i0 97.7 0.891891891891892 88 2 89.2 0 294 31 2 89 WP_336505994.1 eL38 family ribosomal protein, partial [Klebsiella pneumoniae] diamond 264 157 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella pneumoniae
29813787 29813787 PRJNA1025141_P_NODE_6911_length_303_cov_1.069565_g6850_i0 PRJNA1025141 6911 303 1.069565 3.24078195 Ketobacter sp. 2083498 Bacteria Bacteria 59.7 3.97e-8   NR MCP5016269.1 2083498 g6850 i0 40 0.792079207920792 80 48 79.2 0 45 284 108 187 MCP5016269.1 hypothetical protein [Ketobacter sp.] diamond 240 59.7 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Ketobacteraceae Ketobacter Ketobacter sp.
29845456 29845456 PRJNA1025141_P_NODE_2151_length_560_cov_1.367556_g2091_i0 PRJNA1025141 2151 560 1.367556 7.6583136 Colwellia sp. 56799 Bacteria Bacteria 71.2 1.08e-10   NR MCP4986445.1 56799 g2091 i0 39.3 0.653571428571429 122 62 60.5 3 1 339 267 385 MCP4986445.1 hypothetical protein [Colwellia sp.] diamond 366 71.2 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Alteromonadales Colwelliaceae Colwellia Colwellia sp.
29845466 29845466 PRJNA1025141_P_NODE_7571_length_287_cov_0.967290_g7510_i0 PRJNA1025141 7571 287 0.96729 2.7761223 Pseudomonadota bacterium 1977087 Bacteria Bacteria 142 1.31e-38   NR MES2932922.1 1977087 g7510 i0 90.4 0.763066202090592 73 7 76.3 0 280 62 252 324 MES2932922.1 TIGR03118 family protein [Pseudomonadota bacterium] diamond 219 142 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
29908803 29908803 PRJNA1025141_P_NODE_2191_length_555_cov_1.545643_g2131_i0 PRJNA1025141 2191 555 1.545643 8.57831865 Methylomonas koyamae 702114 Bacteria Bacteria 47.8 0.00497   NR WP_054762189.1 702114 g2131 i0 40.2 0.497297297297297 92 45 49.7 1 465 190 4 85 WP_054762189.1 hypothetical protein [Methylomonas koyamae] diamond 276 47.8 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Methylococcales Methylococcaceae Methylomonas Methylomonas koyamae
29932566 29932566 PRJNA1025141_P_NODE_2871_length_483_cov_1.200000_g2810_i0 PRJNA1025141 2871 483 1.2 5.796 Bacteria 2 Bacteria Bacteria 59.3 5.89e-7   NR WP_128385083.1 265883 g2810 i0 33.1 2.37888198757764 127 73 78.3 3 477 100 180 295 WP_128385083.1 carbonic anhydrase [Hydrogenovibrio thermophilus] diamond 1149 59.3 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Thiotrichales Piscirickettsiaceae Hydrogenovibrio Hydrogenovibrio thermophilus
30351518 30351518 PRJNA1025141_P_NODE_13152_length_241_cov_0.916667_g13091_i0 PRJNA1025141 13152 241 0.916667 2.20916747 Aquariibacter albus 2759899 Bacteria Bacteria 155 5.24e-45   NR WP_220486049.1 2759899 g13091 i0 100 0.970954356846473 78 0 97.1 0 3 236 30 107 WP_220486049.1 transporter substrate-binding domain-containing protein [Aquariibacter albus] diamond 234 155 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Aquariibacter Aquariibacter albus
30666903 30666903 PRJNA1025141_P_NODE_11873_length_244_cov_0.900585_g11812_i0 PRJNA1025141 11873 244 0.900585 2.1974274 Diaphorobacter sp. 1934310 Bacteria Bacteria 42.7 0.0362   NR WP_313297496.1 1934310 g11812 i0 37.5 0.688524590163934 56 34 67.6 1 175 11 46 101 WP_313297496.1 DNA-binding protein [Diaphorobacter sp.] diamond 168 42.7 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Diaphorobacter Diaphorobacter sp.
31038490 31038490 PRJNA1025141_P_NODE_9875_length_250_cov_0.870056_g9814_i0 PRJNA1025141 9875 250 0.870056 2.17514 Sphingomonadaceae 41297 Bacteria Bacteria 44.3 0.011   NR HET8611159.1 28214 g9814 i0 31.3 1.896 80 51 91.2 1 248 21 248 327 HET8611159.1 FAD-dependent oxidoreductase [Sphingomonas sp.] diamond 474 44.3 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp.
31109094 31109094 PRJNA1025141_P_NODE_4095_length_401_cov_2.198171_g4034_i0 PRJNA1025141 4095 401 2.198171 8.81466571 Pseudomonadota bacterium 1977087 Bacteria Bacteria 191 6.97e-60   NR MEL6702598.1 1977087 g4034 i0 70.7 0.99501246882793 133 38 99.5 1 3 401 3 134 MEL6702598.1 uL15 family ribosomal protein [Pseudomonadota bacterium] diamond 399 191 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
31488953 31488953 PRJNA1025141_P_NODE_9616_length_251_cov_0.865169_g9555_i0 PRJNA1025141 9616 251 0.865169 2.17157419 Xanthobacteraceae bacterium 2021379 Bacteria Bacteria 76.6 3.78e-14   NR HZO45211.1 2021379 g9555 i0 48.7 3.9203187250996 76 29 90.8 2 11 238 221 286 HZO45211.1 glutathionylspermidine synthase family protein [Xanthobacteraceae bacterium] diamond 984 76.6 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Xanthobacteraceae   Xanthobacteraceae bacterium
31615215 31615215 PRJNA1025141_P_NODE_11036_length_247_cov_0.885057_g10975_i0 PRJNA1025141 11036 247 0.885057 2.18609079 Alcanivorax quisquiliarum 2933565 Bacteria Bacteria 62.8 3.09e-9   NR WP_246947449.1 2933565 g10975 i0 42 1.95546558704453 81 46 98.4 1 245 3 237 316 WP_246947449.1 oxygenase MpaB family protein [Alcanivorax quisquiliarum] diamond 483 62.8 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Oceanospirillales Alcanivoracaceae Alcanivorax Alcanivorax quisquiliarum
31646696 31646696 PRJNA1025141_P_NODE_7677_length_285_cov_0.990566_g7616_i0 PRJNA1025141 7677 285 0.990566 2.8231131 Alphaproteobacteria bacterium 1913988 Bacteria Bacteria 130 9.22e-36   NR MCR9177157.1 1913988 g7616 i0 61.3 2.90526315789474 93 36 97.9 0 281 3 99 191 MCR9177157.1 class I SAM-dependent methyltransferase [Alphaproteobacteria bacterium] diamond 828 130 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria       Alphaproteobacteria bacterium
31804947 31804947 PRJNA1025141_P_NODE_5957_length_328_cov_1.313725_g5896_i0 PRJNA1025141 5957 328 1.313725 4.309018 Ramlibacter sp. 1917967 Bacteria Bacteria 44.3 0.0254   NR WP_325109428.1 1917967 g5896 i0 38.8 0.731707317073171 80 47 72.3 2 61 297 146 224 WP_325109428.1 LysR family transcriptional regulator [Ramlibacter sp.] diamond 240 44.3 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Ramlibacter Ramlibacter sp.
31836435 31836435 PRJNA1025141_P_NODE_8277_length_272_cov_1.914573_g8216_i0 PRJNA1025141 8277 272 1.914573 5.20763856 Endozoicomonas sp. SCSIO W 1892382 Bacteria Bacteria 45.4 0.00598   NR WP_252018002.1 2918516 g8216 i0 56.8 1.64338235294118 37 16 40.8 0 50 160 176 212 WP_252018002.1 ankyrin repeat domain-containing protein [Endozoicomonas sp. SCSIO W0465] diamond 447 45.4 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Oceanospirillales Endozoicomonadaceae Endozoicomonas Endozoicomonas sp. SCSIO W0465
31931436 31931436 PRJNA1025141_P_NODE_8337_length_271_cov_1.186869_g8276_i0 PRJNA1025141 8337 271 1.186869 3.21641499 Aquariibacter albus 2759899 Bacteria Bacteria 135 4.3e-35   NR WP_182663598.1 2759899 g8276 i0 84.3 0.985239852398524 89 14 98.5 0 2 268 438 526 WP_182663598.1 hypothetical protein [Aquariibacter albus] diamond 267 135 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Aquariibacter Aquariibacter albus
31963103 31963103 PRJNA1025141_P_NODE_4098_length_401_cov_1.670732_g4037_i0 PRJNA1025141 4098 401 1.670732 6.69963532 Colwellia sp. 56799 Bacteria Bacteria 63.9 7.84e-9   NR MCP4988873.1 56799 g4037 i0 61.1 0.403990024937656 54 21 40.4 0 238 399 393 446 MCP4988873.1 hypothetical protein [Colwellia sp.] diamond 162 63.9 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Alteromonadales Colwelliaceae Colwellia Colwellia sp.
32153072 32153072 PRJNA1025141_P_NODE_2598_length_508_cov_6.487356_g2537_i0 PRJNA1025141 2598 508 6.487356 32.95576848 Escherichia coli 562 Bacteria Bacteria 177 9.209999999999999e-54   NR WP_140424324.1 562 g2537 i0 62.1 2.39763779527559 140 53 82.7 0 503 84 10 149 WP_140424324.1 actin-binding ADF family protein, partial [Escherichia coli] diamond 1218 177 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
32240332 32240332 PRJNA1025141_P_NODE_9078_length_256_cov_1.049180_g9017_i0 PRJNA1025141 9078 256 1.04918 2.6859008 root 1 Root_unresolved Root_unresolved 92 2.38e-20   NR MEN0035601.1 1965322 g9017 i0 59.7 4.7109375 67 27 78.5 0 1 201 86 152 MEN0035601.1 class III extradiol ring-cleavage dioxygenase [Cellvibrio sp.] diamond 1206 92.8 0.991379310344828 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Cellvibrionales Cellvibrionaceae Cellvibrio Cellvibrio sp.
32501316 32501316 PRJNA1025141_P_NODE_10599_length_248_cov_0.880000_g10538_i0 PRJNA1025141 10599 248 0.88 2.1824 Rhizobium sp. 18 391 Bacteria Bacteria 53.9 4.45e-6   NR WP_160003880.1 2681403 g10538 i0 46.8 2.40725806451613 62 32 75 1 187 2 235 295 WP_160003880.1 FAD-dependent monooxygenase [Rhizobium sp. 18055] diamond 597 53.9 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Rhizobiaceae Rhizobium Rhizobium sp. 18055
32658488 32658488 PRJNA1025141_P_NODE_11900_length_244_cov_0.900585_g11839_i0 PRJNA1025141 11900 244 0.900585 2.1974274 Zobellella endophytica 2116700 Bacteria Bacteria 54.7 2.26e-6   NR WP_106728410.1 2116700 g11839 i0 40.3 2.61885245901639 72 37 88.5 2 1 216 289 354 WP_106728410.1 S-methyl-5-thioribose kinase [Zobellella endophytica] diamond 639 54.7 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Aeromonadales Aeromonadaceae Zobellella Zobellella endophytica
32753303 32753303 PRJNA1025141_P_NODE_10840_length_247_cov_0.885057_g10779_i0 PRJNA1025141 10840 247 0.885057 2.18609079 Thiohalobacteraceae bacterium 3107635 Bacteria Bacteria 68.6 1.01e-12   NR MFA7386019.1 3107635 g10779 i0 44.4 2.87854251012146 81 40 92.3 2 244 17 5 85 MFA7386019.1 hypothetical protein [Thiohalobacteraceae bacterium] diamond 711 68.6 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Thiohalobacterales Thiohalobacteraceae   Thiohalobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;