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contig_metadata

17 rows where analysis = "diamond", bioproject = "PRJNA1025141" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA1025141 · 17 ✖

analysis 1

  • diamond · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2713276 2713276 PRJNA1025141_P_NODE_7943_length_279_cov_1.087379_g7882_i0 PRJNA1025141 7943 279 1.087379 3.03378741 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 151 2.39e-41   NR XP_665568.1 353151 g7882 i0 78.9 14.6451612903226 90 19 96.8 0 274 5 39 128 XP_665568.1 Pfsec61 [Cryptosporidium hominis TU502] diamond 4086 152 0.993421052631579 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium hominis
5265603 5265603 PRJNA1025141_P_NODE_2345_length_533_cov_2.500000_g2284_i0 PRJNA1025141 2345 533 2.5 13.325 Babesia bovis T2Bo 484906 SAR_Eukaryotes SAR_Eukaryotes 222 1.84e-65   NR XP_001608890.2 484906 g2284 i0 56.3 1.9812382739212 176 76 99.1 1 2 529 59 233 XP_001608890.2 putative cysteinyl-tRNA synthetase [Babesia bovis T2Bo] diamond 1056 222 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bovis
18014664 18014664 PRJNA1025141_P_NODE_3735_length_420_cov_2.193084_g3674_i0 PRJNA1025141 3735 420 2.193084 9.2109528 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 219 1.33e-70   NR XP_067916959.1 483139 g3674 i0 72.1 8.70714285714286 136 38 97.1 0 2 409 6 141 XP_067916959.1 nucleoside diphosphate kinase [Cystoisospora suis] diamond 3657 219 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
27066506 27066506 PRJNA1025141_P_NODE_22_length_2933_cov_1.832517_g20_i0 PRJNA1025141 22 2933 1.832517 53.74772361 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 51.2 0.0382   NR CDU16592.1 5861 g20 i0 23.3 0.693487896351858 678 403 66 28 2661 727 419 1012 CDU16592.1 reticulocyte binding protein, putative [Plasmodium yoelii] diamond 2034 51.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
27351370 27351370 PRJNA1025141_P_NODE_9023_length_257_cov_1.255435_g8962_i0 PRJNA1025141 9023 257 1.255435 3.22646795 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 52.8 1.2e-5   NR XP_011129685.1 110365 g8962 i0 41.9 1.00389105058366 86 43 95.7 3 12 257 1 83 XP_011129685.1 putative 3-oxo-5-alpha-steroid 4-dehydrogenase [Gregarina niphandrodes] diamond 258 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
27540660 27540660 PRJNA1025141_P_NODE_304_length_1294_cov_1.369369_g280_i0 PRJNA1025141 304 1294 1.369369 17.71963486 Toxoplasma gondii RUB 935652 SAR_Eukaryotes SAR_Eukaryotes 101 7.14e-19   NR KFG59111.1 935652 g280 i0 24.1 0.943585780525502 407 247 92.5 15 1291 95 665 1017 KFG59111.1 F5/8 type C domain-containing protein [Toxoplasma gondii RUB] diamond 1221 101 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
27564019 27564019 PRJNA1025141_P_NODE_5964_length_328_cov_1.207843_g5903_i0 PRJNA1025141 5964 328 1.207843 3.96172504 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 109 3.1e-25   NR XP_029215634.1 94643 g5903 i0 46 10.3353658536585 113 53 97.9 2 3 323 640 750 XP_029215634.1 putative eukaryotic initiation factor-3, subunit 8 [Besnoitia besnoiti] diamond 3390 110 0.990909090909091 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
27974718 27974718 PRJNA1025141_P_NODE_2885_length_482_cov_1.400978_g2824_i0 PRJNA1025141 2885 482 1.400978 6.75271396 Piroplasmida 5863 SAR_Eukaryotes SAR_Eukaryotes 186 5.139999999999999e-57   NR XP_763944.1 333668 g2824 i0 60.1 5.83195020746888 158 62 98.3 1 482 9 2 158 XP_763944.1 ribosomal protein S4 [Theileria parva strain Muguga] diamond 2811 187 0.994652406417112 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria parva
28416908 28416908 PRJNA1025141_P_NODE_12286_length_243_cov_0.905882_g12225_i0 PRJNA1025141 12286 243 0.905882 2.20129326 Plasmodiidae 1639119 SAR_Eukaryotes SAR_Eukaryotes 93.6 4.72e-20   NR SBT77329.1 36330 g12225 i0 55 8.75308641975309 80 35 97.5 1 6 242 72 151 SBT77329.1 dynamin-like protein, putative [Plasmodium ovale] diamond 2127 93.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium ovale
29206320 29206320 PRJNA1025141_P_NODE_10749_length_247_cov_1.327586_g10688_i0 PRJNA1025141 10749 247 1.327586 3.27913742 root 1 Root_unresolved Root_unresolved 52.8 1.19e-5   NR XP_034423160.1 5823 g10688 i0 43.5 5.56275303643725 46 26 55.9 0 192 55 552 597 XP_034423160.1 LCCL domain-containing protein [Plasmodium berghei ANKA] diamond 1374 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
30382974 30382974 PRJNA1025141_P_NODE_4793_length_371_cov_0.882550_g4732_i0 PRJNA1025141 4793 371 0.88255 3.2742605 Theileria equi strain WA 1537102 SAR_Eukaryotes SAR_Eukaryotes 63.2 1.13e-8   NR XP_004830270.1 1537102 g4732 i0 40.8 0.792452830188679 98 50 75.2 3 356 78 291 385 XP_004830270.1 sortilin, putative [Theileria equi strain WA] diamond 294 63.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria equi
31132686 31132686 PRJNA1025141_P_NODE_6595_length_311_cov_1.352941_g6534_i0 PRJNA1025141 6595 311 1.352941 4.20764651 Babesia 5864 SAR_Eukaryotes SAR_Eukaryotes 70.5 1.56e-11   NR KAK1445097.1 33632 g6534 i0 37 3.85852090032154 100 61 96.5 1 302 3 824 921 KAK1445097.1 radical SAM [Babesia gibsoni] diamond 1200 71.2 0.990168539325843 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia gibsoni
31172177 31172177 PRJNA1025141_P_NODE_11995_length_244_cov_0.900585_g11934_i0 PRJNA1025141 11995 244 0.900585 2.1974274 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.00412   NR CAL7862308.1 1344799 g11934 i0 45.5 0.676229508196721 55 23 62.7 2 6 158 281 332 CAL7862308.1 unnamed protein product [Sarcocystis calchasi] diamond 165 45.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
31773287 31773287 PRJNA1025141_P_NODE_6597_length_311_cov_1.294118_g6536_i0 PRJNA1025141 6597 311 1.294118 4.02470698 Cryptosporidium ryanae 515981 SAR_Eukaryotes SAR_Eukaryotes 82.4 9.88e-16   NR XP_067198501.1 515981 g6536 i0 44.8 0.92604501607717 96 50 91.6 3 286 2 178 271 XP_067198501.1 uncharacterized protein FG386_000255, partial [Cryptosporidium ryanae] diamond 288 82.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ryanae
32248285 32248285 PRJNA1025141_P_NODE_9098_length_255_cov_1.692308_g9037_i0 PRJNA1025141 9098 255 1.692308 4.3153854 Cryptosporidium hominis TU5 237895 SAR_Eukaryotes SAR_Eukaryotes 70.1 1.04e-11   NR XP_667741.1 353151 g9037 i0 38.6 0.976470588235294 83 51 97.6 0 255 7 409 491 XP_667741.1 hypothetical protein [Cryptosporidium hominis TU502] diamond 249 70.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium hominis
32564645 32564645 PRJNA1025141_P_NODE_13019_length_241_cov_0.916667_g12958_i0 PRJNA1025141 13019 241 0.916667 2.20916747 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 50.1 3.05e-5   NR CAL7862950.1 1344799 g12958 i0 35 0.995850622406639 80 51 98.3 1 5 241 12 91 CAL7862950.1 unnamed protein product [Sarcocystis calchasi] diamond 240 50.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
32808374 32808374 PRJNA1025141_P_NODE_8860_length_260_cov_2.032086_g8799_i0 PRJNA1025141 8860 260 2.032086 5.2834236 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 110 1.53e-29   NR XP_028859676.1 5858 g8799 i0 57.8 5.79230769230769 83 35 95.8 0 2 250 6 88 XP_028859676.1 60S ribosomal protein L37ae, putative [Plasmodium malariae] diamond 1506 110 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium malariae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;