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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA1022139" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA1022139 · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16306028 16306028 PRJNA1022139_P_NODE_20993_length_306_cov_0.944206_g20888_i0 PRJNA1022139 20993 306 0.944206 2.88927036 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 168 7.36e-46   NR ETO05095.1 46433 g20888 i0 73.5 2 102 27 100 0 306 1 560 661 ETO05095.1 hypothetical protein RFI_32303 [Reticulomyxa filosa] diamond 612 168 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
19287273 19287273 PRJNA1022139_P_NODE_19256_length_318_cov_1.220408_g19151_i0 PRJNA1022139 19256 318 1.220408 3.88089744 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 95.1 3.62e-20   NR ETO22562.1 46433 g19151 i0 53.2 2.20754716981132 77 36 72.6 0 317 87 467 543 ETO22562.1 hypothetical protein RFI_14635 [Reticulomyxa filosa] diamond 702 95.5 0.995811518324607 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27982520 27982520 PRJNA1022139_P_NODE_11545_length_395_cov_1.434783_g11440_i0 PRJNA1022139 11545 395 1.434783 5.66739285 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 88.6 1.84e-17   NR ETO23176.1 46433 g11440 i0 45.6 0.683544303797468 90 47 67.6 2 267 1 1 89 ETO23176.1 hypothetical protein RFI_14010 [Reticulomyxa filosa] diamond 270 88.6 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28701050 28701050 PRJNA1022139_P_NODE_11147_length_401_cov_1.527439_g11042_i0 PRJNA1022139 11147 401 1.527439 6.12503039 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 78.2 8.77e-14   NR ETO33024.1 46433 g11042 i0 55.2 3.12718204488778 58 26 43.4 0 227 400 659 716 ETO33024.1 hypothetical protein RFI_04084, partial [Reticulomyxa filosa] diamond 1254 78.2 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
29687223 29687223 PRJNA1022139_P_NODE_39350_length_245_cov_0.895349_g39245_i0 PRJNA1022139 39350 245 0.895349 2.19360505 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.00442   NR ETO14021.1 46433 g39245 i0 32.1 1.95918367346939 81 49 99.2 2 1 243 81 155 ETO14021.1 Ubiquitin carboxyl-terminal hydrolase family protein [Reticulomyxa filosa] diamond 480 45.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
29940364 29940364 PRJNA1022139_P_NODE_43611_length_232_cov_3.415094_g43506_i0 PRJNA1022139 43611 232 3.415094 7.92301808 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.0121   NR ETO30854.1 46433 g43506 i0 29.4 1.6551724137931 68 48 87.9 0 18 221 223 290 ETO30854.1 hypothetical protein RFI_06265 [Reticulomyxa filosa] diamond 384 43.9 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30161065 30161065 PRJNA1022139_P_NODE_14052_length_363_cov_1.593103_g13947_i0 PRJNA1022139 14052 363 1.593103 5.78296389 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 89 8.85e-18   NR ETO32881.1 46433 g13947 i0 37.5 0.925619834710744 112 70 92.6 0 3 338 313 424 ETO32881.1 hypothetical protein RFI_04239 [Reticulomyxa filosa] diamond 336 89 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30501067 30501067 PRJNA1022139_P_NODE_26673_length_279_cov_1.194175_g26568_i0 PRJNA1022139 26673 279 1.194175 3.33174825 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 77.8 2.72e-14   NR ETO24993.1 46433 g26568 i0 44.1 1.94623655913978 93 48 95.7 1 270 4 97 189 ETO24993.1 hypothetical protein RFI_12152, partial [Reticulomyxa filosa] diamond 543 77.8 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31140388 31140388 PRJNA1022139_P_NODE_34635_length_251_cov_0.865169_g34530_i0 PRJNA1022139 34635 251 0.865169 2.17157419 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 69.7 5.43e-12   NR ETO07263.1 46433 g34530 i0 63.5 1.54183266932271 52 19 62.2 0 4 159 168 219 ETO07263.1 Ras family protein [Reticulomyxa filosa] diamond 387 69.7 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31994829 31994829 PRJNA1022139_P_NODE_9998_length_421_cov_1.307471_g9893_i0 PRJNA1022139 9998 421 1.307471 5.50445291 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 61.2 9.46e-8   NR ETO23063.1 46433 g9893 i0 31.7 1.57482185273159 123 83 87.6 1 20 388 558 679 ETO23063.1 hypothetical protein RFI_14122, partial [Reticulomyxa filosa] diamond 663 61.2 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32057989 32057989 PRJNA1022139_P_NODE_14898_length_354_cov_3.462633_g14793_i0 PRJNA1022139 14898 354 3.462633 12.25772082 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 129 5.06e-35   NR ETO34651.1 46433 g14793 i0 70.6 0.720338983050847 85 25 72 0 349 95 111 195 ETO34651.1 beta-hexosaminidase [Reticulomyxa filosa] diamond 255 129 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32879161 32879161 PRJNA1022139_P_NODE_9280_length_436_cov_0.763085_g9175_i0 PRJNA1022139 9280 436 0.763085 3.3270506 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 50.4 4.5e-4   NR ETO16473.1 46433 g9175 i0 44.4 1.19724770642202 63 34 42.7 1 4 189 60 122 ETO16473.1 hypothetical protein RFI_20867 [Reticulomyxa filosa] diamond 522 50.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;