RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1022139" and tax_phylum = "Candidatus Falkowiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Falkowiibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1022139 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28551061 28551061 PRJNA1022139_P_NODE_3387_length_683_cov_1.585246_g3287_i0 PRJNA1022139 3387 683 1.585246 10.82723018 Candidatus Falkowbacteria bacterium HGW-Falkowbacteria-2 2013769 Bacteria Bacteria 52.8 5.65e-4   NR PKM87958.1 2013769 g3287 i0 30.8 0.513909224011713 117 69 51.4 3 324 674 930 1034 PKM87958.1 MAG: hypothetical protein CVU83_02370 [Candidatus Falkowbacteria bacterium HGW-Falkowbacteria-2] diamond 351 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium HGW-Falkowbacteria-2
31646632 31646632 PRJNA1022139_P_NODE_35997_length_249_cov_1.312500_g35892_i0 PRJNA1022139 35997 249 1.3125 3.268125 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 42.7 0.0299   NR MBN1325841.1 2053554 g35892 i0 33.3 0.795180722891566 66 44 79.5 0 44 241 102 167 MBN1325841.1 hypothetical protein [Candidatus Falkowbacteria bacterium] diamond 198 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;