RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1020854" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA1020854 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9088473 9088473 PRJNA1020854_S_NODE_24728_length_214_cov_2.935135_g21964_i0 PRJNA1020854 24728 214 2.935135 6.2811889 Panax cryptic virus 4 2809267 Viruses Viruses 126 3.1699999999999996e-32   NR QRG29207.1 2809267 g21964 i0 84.3 0.981308411214953 70 11 98.1 0 2 211 151 220 QRG29207.1 putative CP [Panax cryptic virus 4] diamond 210 126 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Panax cryptic virus 4
28361263 28361263 PRJNA1020854_S_NODE_10486_length_399_cov_3.470270_g7745_i0 PRJNA1020854 10486 399 3.47027 13.8463773 Panax cryptic virus 4 2809267 Viruses Viruses 137 2.17e-39   NR WAQ73893.1 2809267 g7745 i0 84.3 1.24812030075188 83 13 62.4 0 396 148 14 96 WAQ73893.1 coat protein, partial [Panax cryptic virus 4] diamond 498 137 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Panax cryptic virus 4
28740288 28740288 PRJNA1020854_S_NODE_30427_length_187_cov_2.753165_g27663_i0 PRJNA1020854 30427 187 2.753165 5.14841855 Pear alphapartitivirus 1968821 Viruses Viruses 100 5.81e-23   NR BBA66578.1 1968821 g27663 i0 78.7 1.9572192513369 61 13 97.9 0 3 185 351 411 BBA66578.1 capsid protein [Pear alphapartitivirus] diamond 366 100 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae Alphapartitivirus Pear alphapartitivirus
30351407 30351407 PRJNA1020854_S_NODE_6692_length_629_cov_4.468333_g4144_i0 PRJNA1020854 6692 629 4.468333 28.10581457 Erysiphe necator associated deltaflexivirus 2 2743095 Viruses Viruses 68.2 2.27e-10   NR QKN22648.1 2743095 g4144 i0 58 0.73449920508744 50 21 23.8 0 22 171 124 173 QKN22648.1 hypothetical protein [Erysiphe necator associated deltaflexivirus 2] diamond 462 68.2 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae Deltaflexivirus Erysiphe necator associated deltaflexivirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;