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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1020854" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

bioproject 1

  • PRJNA1020854 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6538966 6538966 PRJNA1020854_S_NODE_17146_length_274_cov_795.844898_g14382_i0 PRJNA1020854 17146 274 795.844898 2180.61502052 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 96.7 4.68e-22   NR KAJ1426429.1 483371 g14382 i0 76.9 0.711678832116788 65 15 71.2 0 196 2 1 65 KAJ1426429.1 integral membrane protein DUF106-domain-containing protein [Ochromonadaceae sp. CCMP2298] diamond 195 96.7 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
24386769 24386769 PRJNA1020854_S_NODE_13660_length_324_cov_5.596610_g10896_i0 PRJNA1020854 13660 324 5.59661 18.1330164 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 172 3.1499999999999998e-52   NR KAJ1424879.1 483371 g10896 i0 85.3 0.87962962962963 95 14 88 0 40 324 6 100 KAJ1424879.1 ribosomal L18ae/LX protein domain-containing protein [Ochromonadaceae sp. CCMP2298] diamond 285 172 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
31868033 31868033 PRJNA1020854_S_NODE_42477_length_152_cov_2.756098_g39713_i0 PRJNA1020854 42477 152 2.756098 4.18926896 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 45.1 0.00165   NR KAJ1437746.1 483371 g39713 i0 57.6 0.651315789473684 33 14 65.1 0 151 53 194 226 KAJ1437746.1 histone acetylation protein-domain-containing protein [Ochromonadaceae sp. CCMP2298] diamond 99 45.1 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
32343027 32343027 PRJNA1020854_S_NODE_38539_length_161_cov_2.863636_g35775_i0 PRJNA1020854 38539 161 2.863636 4.61045396 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 46.2 7.37e-4   NR KAJ1437746.1 483371 g35775 i0 56.8 0.819875776397516 44 18 82 1 28 159 69 111 KAJ1437746.1 histone acetylation protein-domain-containing protein [Ochromonadaceae sp. CCMP2298] diamond 132 46.2 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;