RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1020641" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1020641 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6538793 6538793 PRJNA1020641_P_NODE_3566_length_324_cov_1.227092_g3523_i0 PRJNA1020641 3566 324 1.227092 3.97577808 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 99.4 1.43e-21   NR KAK2951927.1 2049346 g3523 i0 49.5 0.990740740740741 107 47 99.1 2 1 321 2931 3030 KAK2951927.1 putative Dynein beta chain, ciliary [Blattamonas nauphoetae] diamond 321 99.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae
26908332 26908332 PRJNA1020641_P_NODE_4122_length_299_cov_1.362832_g4079_i0 PRJNA1020641 4122 299 1.362832 4.07486768 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 48.9 4.47e-4   NR KAJ4458848.1 342808 g4079 i0 35.4 0.963210702341137 96 52 93.3 3 2 280 169 257 KAJ4458848.1 putative Transcription initiation factor IIB [Paratrimastix pyriformis] diamond 288 48.9 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;