contig_metadata
7 rows where analysis = "diamond", bioproject = "PRJNA1020641" and tax_phylum = "Chordata"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27856111 | 27856111 | PRJNA1020641_P_NODE_3625_length_321_cov_1.354839_g3582_i0 | PRJNA1020641 | 3625 | 321 | 1.354839 | 4.34903319 | Ranitomeya imitator | 111125 | Chordata | Chordata | 62 | 1.59e-8 | NR | CAJ0933392.1 | 111125 | g3582 | i0 | 62.5 | 0.448598130841121 | 48 | 16 | 43 | 1 | 142 | 5 | 53 | 100 | CAJ0933392.1 unnamed protein product [Ranitomeya imitator] | diamond | 144 | 62 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Dendrobatidae | Ranitomeya | Ranitomeya imitator | |
| 29964001 | 29964001 | PRJNA1020641_P_NODE_2691_length_373_cov_1.173333_g2648_i0 | PRJNA1020641 | 2691 | 373 | 1.173333 | 4.37653209 | Chordata | 7711 | Chordata | Chordata | 115 | 5.7600000000000005e-27 | NR | OCT97315.1 | 8355 | g2648 | i0 | 50.4 | 64.7372654155496 | 115 | 50 | 91.7 | 2 | 372 | 31 | 2524 | 2632 | OCT97315.1 hypothetical protein XELAEV_18009541mg [Xenopus laevis] | diamond | 24147 | 116 | 0.991379310344828 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Pipidae | Xenopus | Xenopus laevis | |
| 30571779 | 30571779 | PRJNA1020641_P_NODE_1653_length_474_cov_1.129676_g1610_i0 | PRJNA1020641 | 1653 | 474 | 1.129676 | 5.35466424 | Leucoraja erinaceus | 7782 | Chordata | Chordata | 47.8 | 0.00515 | NR | XP_055487001.1 | 7782 | g1610 | i0 | 48.5 | 1.4746835443038 | 66 | 30 | 40.5 | 3 | 51 | 242 | 152 | 215 | XP_055487001.1 E3 ubiquitin-protein ligase TRIM47-like isoform X1 [Leucoraja erinaceus] | diamond | 699 | 47.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Chondrichthyes | Rajiformes | Rajidae | Leucoraja | Leucoraja erinaceus | |
| 31638821 | 31638821 | PRJNA1020641_P_NODE_4136_length_299_cov_0.876106_g4093_i0 | PRJNA1020641 | 4136 | 299 | 0.876106 | 2.61955694 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 108 | 4.01e-25 | NR | CAG5091339.1 | 34765 | g4093 | i0 | 54.5 | 13.0234113712375 | 99 | 43 | 97.3 | 1 | 1 | 291 | 29 | 127 | CAG5091339.1 Oidioi.mRNA.OKI2018_I69.PAR.g12983.t2.cds [Oikopleura dioica] | diamond | 3894 | 109 | 0.990825688073395 | Eukaryota | Opisthokonta | Metazoa | Chordata | Appendicularia | Copelata | Oikopleuridae | Oikopleura | Oikopleura dioica | |
| 32279690 | 32279690 | PRJNA1020641_P_NODE_6919_length_244_cov_0.900585_g6876_i0 | PRJNA1020641 | 6919 | 244 | 0.900585 | 2.1974274 | Miniopterus natalensis | 291302 | Chordata | Chordata | 73.9 | 3.55e-13 | NR | XP_016074710.1 | 291302 | g6876 | i0 | 48 | 0.922131147540984 | 75 | 39 | 92.2 | 0 | 15 | 239 | 88 | 162 | XP_016074710.1 PREDICTED: actin-related protein T2 [Miniopterus natalensis] | diamond | 225 | 73.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Chiroptera | Miniopteridae | Miniopterus | Miniopterus natalensis | |
| 32374550 | 32374550 | PRJNA1020641_P_NODE_6459_length_246_cov_0.890173_g6416_i0 | PRJNA1020641 | 6459 | 246 | 0.890173 | 2.18982558 | Rousettus aegyptiacus | 9407 | Chordata | Chordata | 76.6 | 4.43e-14 | NR | XP_036077575.1 | 9407 | g6416 | i0 | 47.9 | 2.48780487804878 | 73 | 34 | 89 | 1 | 230 | 12 | 65 | 133 | XP_036077575.1 kinesin-like protein KIF18A isoform X2 [Rousettus aegyptiacus] | diamond | 612 | 76.6 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Chiroptera | Pteropodidae | Rousettus | Rousettus aegyptiacus | |
| 32690083 | 32690083 | PRJNA1020641_P_NODE_5380_length_254_cov_1.309392_g5337_i0 | PRJNA1020641 | 5380 | 254 | 1.309392 | 3.32585568 | Ranitomeya imitator | 111125 | Chordata | Chordata | 45.4 | 0.00433 | NR | CAJ0956274.1 | 111125 | g5337 | i0 | 50 | 0.838582677165354 | 34 | 17 | 40.2 | 0 | 102 | 1 | 1 | 34 | CAJ0956274.1 unnamed protein product [Ranitomeya imitator] | diamond | 213 | 45.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Dendrobatidae | Ranitomeya | Ranitomeya imitator |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;