RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA1020641" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1020641 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27034863 27034863 PRJNA1020641_P_NODE_4662_length_278_cov_1.975610_g4619_i0 PRJNA1020641 4662 278 1.97561 5.4921958 Drechmeria coniospora 98403 Fungi Fungi 45.4 0.00643   NR ODA83239.1 98403 g4619 i0 29.2 0.960431654676259 89 54 96 2 5 271 328 407 ODA83239.1 hypothetical protein RJ55_01751 [Drechmeria coniospora] diamond 267 45.4 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Ophiocordycipitaceae Drechmeria Drechmeria coniospora
28645644 28645644 PRJNA1020641_P_NODE_6707_length_245_cov_0.895349_g6664_i0 PRJNA1020641 6707 245 0.895349 2.19360505 Microdochium nivale 5520 Fungi Fungi 43.9 0.0149   NR KAJ1334021.1 5520 g6664 i0 43.1 0.710204081632653 58 29 67.3 2 225 61 155 211 KAJ1334021.1 hypothetical protein MN608_04019 [Microdochium nivale] diamond 174 43.9 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Xylariales Microdochiaceae Microdochium Microdochium nivale
28763963 28763963 PRJNA1020641_P_NODE_7107_length_243_cov_0.905882_g7064_i0 PRJNA1020641 7107 243 0.905882 2.20129326 Opisthokonta 33154 Fungi Fungi 48.9 1.31e-4   NR KAK9458337.1 27313 g7064 i0 42.1 2.38271604938272 57 29 70.4 1 238 68 127 179 KAK9458337.1 small GTPase superfamily [Dipodascopsis uninucleata] diamond 579 49.3 0.991886409736308 Eukaryota Opisthokonta Fungi Ascomycota Lipomycetes Lipomycetales Lipomycetaceae Dipodascopsis Dipodascopsis uninucleata
28858648 28858648 PRJNA1020641_P_NODE_6428_length_246_cov_0.890173_g6385_i0 PRJNA1020641 6428 246 0.890173 2.18982558 Opisthokonta 33154 Fungi Fungi 99.4 3.32e-22   NR POR32051.1 94208 g6385 i0 73.8 26.8414634146341 61 16 74.4 0 183 1 88 148 POR32051.1 Uncharacterized protein TPAR_07702, partial [Tolypocladium paradoxum] diamond 6603 100 0.994 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Ophiocordycipitaceae Tolypocladium Tolypocladium paradoxum
30161028 30161028 PRJNA1020641_P_NODE_7212_length_242_cov_0.911243_g7169_i0 PRJNA1020641 7212 242 0.911243 2.20520806 Nemania diffusa 389665 Fungi Fungi 52.4 1.4e-5   NR KAI1149683.1 389665 g7169 i0 73.3 0.756198347107438 30 8 37.2 0 5 94 333 362 KAI1149683.1 kinase-like domain-containing protein, partial [Nemania diffusa] diamond 183 52.4 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Xylariales Xylariaceae Nemania Nemania diffusa
30445789 30445789 PRJNA1020641_P_NODE_6613_length_245_cov_0.895349_g6570_i0 PRJNA1020641 6613 245 0.895349 2.19360505 Debaryomyces fabryi 58627 Fungi Fungi 50.4 7.22e-5   NR XP_015468683.1 58627 g6570 i0 37.2 0.955102040816327 78 43 95.5 2 234 1 151 222 XP_015468683.1 uncharacterized protein AC631_01664 [Debaryomyces fabryi] diamond 234 50.4 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Debaryomyces Debaryomyces fabryi
31583678 31583678 PRJNA1020641_P_NODE_5796_length_250_cov_0.870056_g5753_i0 PRJNA1020641 5796 250 0.870056 2.17514 Apiospora kogelbergensis 1337665 Fungi Fungi 62 6.54e-9   NR XP_066728334.1 1337665 g5753 i0 56.5 5.676 62 26 74.4 1 63 248 981 1041 XP_066728334.1 ubiquitin elongating factor core [Apiospora kogelbergensis] diamond 1419 62 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Amphisphaeriales Apiosporaceae Apiospora Apiospora kogelbergensis
31986781 31986781 PRJNA1020641_P_NODE_6378_length_247_cov_0.885057_g6335_i0 PRJNA1020641 6378 247 0.885057 2.18609079 Fungi 4751 Fungi Fungi 114 1.92e-27   NR PWW78180.1 42249 g6335 i0 63.4 8.92712550607287 82 30 99.6 0 246 1 1082 1163 PWW78180.1 P-loop containing nucleoside triphosphate hydrolase protein [Tuber magnatum] diamond 2205 114 1 Eukaryota Opisthokonta Fungi Ascomycota Pezizomycetes Pezizales Tuberaceae Tuber Tuber magnatum
32216277 32216277 PRJNA1020641_P_NODE_5498_length_251_cov_1.000000_g5455_i0 PRJNA1020641 5498 251 1 2.51 Stylonectria norvegica 1736662 Fungi Fungi 44.3 0.0116   NR KAF7562338.1 1736662 g5455 i0 31.4 0.836653386454183 70 33 78.9 3 19 216 360 418 KAF7562338.1 hypothetical protein G7046_g1775 [Stylonectria norvegica] diamond 210 44.3 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Stylonectria Stylonectria norvegica

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;