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contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA1016321" and tax_superkingdom = "Viruses"

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tax_kingdom 3

tax_superkingdom 1

  • Viruses · 32 ✖

bioproject 1

  • PRJNA1016321 · 32 ✖

analysis 1

  • diamond · 32 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7380415 7380415 PRJNA1016321_P_NODE_6_length_7441_cov_9.979370_g4_i0 PRJNA1016321 6 7441 9.97937 742.5649217 Venezuelan equine encephalitis virus 11036 Viruses Viruses 4739 0   NR NP_040822.1 11036 g4 i0 98.5 0.995833893293912 2470 36 99.6 0 7439 30 24 2493 NP_040822.1 non-structural polyprotein precursor P1234 [Venezuelan equine encephalitis virus] diamond 7410 4739 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus venezuelan
13756102 13756102 PRJNA1016321_P_NODE_171_length_2662_cov_7.118965_g156_i0 PRJNA1016321 171 2662 7.118965 189.5068483 Apis mellifera associated ourmia-like virus 2 3373667 Viruses Viruses 776 3.45e-269   NR XII93055.1 3373667 g156 i0 59.4 0.793388429752066 704 263 77.3 8 86 2143 43 741 XII93055.1 RNA-dependent RNA polymerase [Apis mellifera associated ourmia-like virus 2] diamond 2112 776 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Apis mellifera associated ourmia-like virus 2
26749571 26749571 PRJNA1016321_P_NODE_29961_length_332_cov_2.428571_g29730_i0 PRJNA1016321 29961 332 2.428571 8.06285572 Thermus phage phiYS4 407392 Viruses Viruses 177 4.45e-49   NR YP_874015.1 407392 g29730 i0 77.3 0.993975903614458 110 24 99.4 1 2 331 743 851 YP_874015.1 hypothetical protein YS40_002 [Thermus phage phiYS40] diamond 330 177 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Thermus phage phiYS40
26781783 26781783 PRJNA1016321_P_NODE_12661_length_557_cov_2.000000_g12438_i0 PRJNA1016321 12661 557 2 11.14 Leptosphaeria biglobosa deltaflexivirus 1 2921231 Viruses Viruses 138 5.18e-36   NR UNI72638.1 2921231 g12438 i0 46.6 0.958707360861759 178 86 91.6 2 547 38 79 255 UNI72638.1 MAG: hypothetical protein [Leptosphaeria biglobosa deltaflexivirus 1] diamond 534 138 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae   Leptosphaeria biglobosa deltaflexivirus 1
26813391 26813391 PRJNA1016321_P_NODE_54581_length_243_cov_0.905882_g54350_i0 PRJNA1016321 54581 243 0.905882 2.20129326 Thermus phage TH115 3079687 Viruses Viruses 61.6 6.07e-9   NR WQZ00040.1 3079687 g54350 i0 41.9 0.91358024691358 74 42 91.4 1 21 242 43 115 WQZ00040.1 hypothetical protein [Thermus phage TH115] diamond 222 61.6 1 Viruses               Thermus phage TH115
27161006 27161006 PRJNA1016321_P_NODE_34882_length_304_cov_1.017316_g34651_i0 PRJNA1016321 34882 304 1.017316 3.09264064 Caudoviricetes sp. 2832643 Viruses Viruses 174 7.21e-50   NR XOR12631.1 2832643 g34651 i0 81.2 0.996710526315789 101 19 99.7 0 2 304 228 328 XOR12631.1 MAG: ATP-dependent DNA helicase uvsW [Caudoviricetes sp.] diamond 303 174 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
27571984 27571984 PRJNA1016321_P_NODE_35384_length_301_cov_1.350877_g35153_i0 PRJNA1016321 35384 301 1.350877 4.06613977 Caudoviricetes sp. 2832643 Viruses Viruses 135 2.03e-36   NR XOR12615.1 2832643 g35153 i0 61 0.996677740863787 100 39 99.7 0 2 301 35 134 XOR12615.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 300 135 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
27595968 27595968 PRJNA1016321_P_NODE_20004_length_427_cov_2.669492_g19773_i0 PRJNA1016321 20004 427 2.669492 11.39873084 Viruses 10239 Viruses Viruses 149 1.47e-39   NR QDH86582.1 2585031 g19773 i0 51.8 1.98829039812646 141 66 99.1 2 425 3 340 478 QDH86582.1 MAG: RNA-dependent RNA polymerase [Riboviria sp.] diamond 849 150 0.993333333333333 Viruses               Riboviria sp.
27698661 27698661 PRJNA1016321_P_NODE_49824_length_249_cov_0.875000_g49593_i0 PRJNA1016321 49824 249 0.875 2.17875 Caudoviricetes sp. 2832643 Viruses Viruses 92 2.1500000000000003e-21   NR XOR12618.1 2832643 g49593 i0 56.1 0.987951807228916 82 36 98.8 0 248 3 10 91 XOR12618.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 246 92 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
27698664 27698664 PRJNA1016321_P_NODE_57324_length_230_cov_5.968153_g57093_i0 PRJNA1016321 57324 230 5.968153 13.7267519 Skokie reo-like virus 2789444 Viruses Viruses 43.1 0.0234   NR QPF16728.1 2789444 g57093 i0 74.1 0.352173913043478 27 7 35.2 0 83 3 21 47 QPF16728.1 hypothetical protein 2 [Skokie reo-like virus] diamond 81 43.1 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Skokie reo-like virus
27730210 27730210 PRJNA1016321_P_NODE_30064_length_332_cov_1.189189_g29833_i0 PRJNA1016321 30064 332 1.189189 3.94810748 Malassezia globosa associated totivirus 1 3048756 Viruses Viruses 233 1.71e-70   NR CAI9858974.1 3048756 g29833 i0 99.1 0.993975903614458 110 1 99.4 0 2 331 166 275 CAI9858974.1 capsid protein [Malassezia globosa associated totivirus 1] diamond 330 233 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Malassezia globosa associated totivirus 1
28045566 28045566 PRJNA1016321_P_NODE_24525_length_376_cov_1.016502_g24294_i0 PRJNA1016321 24525 376 1.016502 3.82204752 Suillus luteus botourmiavirus 1 3067802 Viruses Viruses 88.2 2.03e-17   NR WLK77426.1 3067802 g24294 i0 42.7 0.933510638297872 117 61 90.2 3 351 13 469 583 WLK77426.1 RNA-dependent RNA polymerase [Suillus luteus botourmiavirus 1] diamond 351 88.2 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Suillus luteus botourmiavirus 1
28171865 28171865 PRJNA1016321_P_NODE_17966_length_456_cov_1.746736_g17736_i0 PRJNA1016321 17966 456 1.746736 7.96511616 Grapevine wood holobiome associated mononegaambi virus 1 3385175 Viruses Viruses 63.5 9.58e-9   NR XLV09863.1 3385175 g17736 i0 38.3 1.06578947368421 81 50 53.3 0 442 200 180 260 XLV09863.1 hypothetical protein [Grapevine wood holobiome associated mononegaambi virus 1] diamond 486 63.5 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales     Grapevine wood holobiome associated mononegaambi virus 1
28550993 28550993 PRJNA1016321_P_NODE_28027_length_346_cov_2.172161_g27796_i0 PRJNA1016321 28027 346 2.172161 7.51567706 Escherichia phage Copypasta 3096133 Viruses Viruses 48.9 3.99e-5   NR WPH57058.1 3096133 g27796 i0 64.1 0.338150289017341 39 14 33.8 0 225 109 18 56 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 117 48.9 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
28574512 28574512 PRJNA1016321_P_NODE_33907_length_309_cov_1.144068_g33676_i0 PRJNA1016321 33907 309 1.144068 3.53517012 Narnavirus 186767 Viruses Viruses 55.8 1.23e-6   NR WNA22205.1 2719492 g33676 i0 35.6 1.45631067961165 104 61 99 4 3 308 54 153 WNA22205.1 MAG: hypothetical protein [Downy mildew lesion associated splipalmivirus 1] diamond 450 55.8 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Downy mildew lesion associated splipalmivirus 1
28582511 28582511 PRJNA1016321_P_NODE_17907_length_457_cov_1.690104_g17677_i0 PRJNA1016321 17907 457 1.690104 7.72377528 Leptosphaeria biglobosa deltaflexivirus 2 2985705 Viruses Viruses 156 8.79e-41   NR UYL94495.1 2985705 g17677 i0 51.3 0.99781181619256 152 74 99.8 0 2 457 574 725 UYL94495.1 MAG: RNA-dependent RNA polymerase [Leptosphaeria biglobosa deltaflexivirus 2] diamond 456 156 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae   Leptosphaeria biglobosa deltaflexivirus 2
29119379 29119379 PRJNA1016321_P_NODE_32949_length_314_cov_1.477178_g32718_i0 PRJNA1016321 32949 314 1.477178 4.63833892 Botourmiaviridae sp. 2808997 Viruses Viruses 121 2.32e-29   NR WAK77813.1 2808997 g32718 i0 58.7 0.993630573248408 104 40 99.4 1 2 313 99 199 WAK77813.1 MAG: RNA-dependent RNA polymerase [Botourmiaviridae sp.] diamond 312 121 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
29371787 29371787 PRJNA1016321_P_NODE_29029_length_339_cov_1.157895_g28798_i0 PRJNA1016321 29029 339 1.157895 3.92526405 Lichen partiti-like RNA virus 1 2726936 Viruses Viruses 91.7 7.47e-19   NR BCD56382.1 2726936 g28798 i0 56.2 0.646017699115044 73 32 64.6 0 336 118 462 534 BCD56382.1 putative coat protein [Lichen partiti-like RNA virus 1] diamond 219 91.7 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Lichen partiti-like RNA virus 1
29623813 29623813 PRJNA1016321_P_NODE_51490_length_246_cov_3.942197_g51259_i0 PRJNA1016321 51490 246 3.942197 9.69780462 Brevibacillus phage Jenst 1691954 Viruses Viruses 105 2.32e-24   NR YP_009199142.1 1691954 g51259 i0 60.8 0.963414634146341 79 31 96.3 0 9 245 98 176 YP_009199142.1 putative ribonucleotide-diphosphate reductase subunit alpha [Brevibacillus phage Jenst] diamond 237 105 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Jenstvirus Jenstvirus jenst
29908681 29908681 PRJNA1016321_P_NODE_4431_length_966_cov_2.893617_g4260_i0 PRJNA1016321 4431 966 2.893617 27.95234022 Plasmopara viticola lesion associated mononegaambi virus 9 2692021 Viruses Viruses 130 1.8799999999999998e-32   NR WKE35292.1 2692021 g4260 i0 42.1 0.493788819875776 159 92 49.4 0 785 309 4 162 WKE35292.1 hypothetical protein [Plasmopara viticola lesion associated mononegaambi virus 9] diamond 477 130 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Mymonaviridae Penicillimonavirus Penicillimonavirus etaplasmoparae
30508825 30508825 PRJNA1016321_P_NODE_56713_length_238_cov_2.600000_g56482_i0 PRJNA1016321 56713 238 2.6 6.188 Leptosphaeria biglobosa deltaflexivirus 2 2985705 Viruses Viruses 142 3.2499999999999996e-37   NR UYL94495.1 2985705 g56482 i0 87.3 0.995798319327731 79 10 99.6 0 1 237 1704 1782 UYL94495.1 MAG: RNA-dependent RNA polymerase [Leptosphaeria biglobosa deltaflexivirus 2] diamond 237 142 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae   Leptosphaeria biglobosa deltaflexivirus 2
30729942 30729942 PRJNA1016321_P_NODE_53194_length_244_cov_2.070175_g52963_i0 PRJNA1016321 53194 244 2.070175 5.051227 Caudoviricetes sp. 2832643 Viruses Viruses 123 1.94e-30   NR XOR12644.1 2832643 g52963 i0 79.7 0.909836065573771 74 15 91 0 243 22 281 354 XOR12644.1 MAG: putative primase [Caudoviricetes sp.] diamond 222 123 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
30824719 30824719 PRJNA1016321_P_NODE_17894_length_457_cov_2.088542_g17664_i0 PRJNA1016321 17894 457 2.088542 9.54463694 Leptosphaeria biglobosa deltaflexivirus 2 2985705 Viruses Viruses 252 2.69e-74   NR UYL94495.1 2985705 g17664 i0 80.9 0.99781181619256 152 29 99.8 0 1 456 387 538 UYL94495.1 MAG: RNA-dependent RNA polymerase [Leptosphaeria biglobosa deltaflexivirus 2] diamond 456 252 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae   Leptosphaeria biglobosa deltaflexivirus 2
30824729 30824729 PRJNA1016321_P_NODE_7574_length_739_cov_2.163664_g7373_i0 PRJNA1016321 7574 739 2.163664 15.98947696 Leptosphaeria biglobosa deltaflexivirus 2 2985705 Viruses Viruses 391 2.58e-121   NR UYL94495.1 2985705 g7373 i0 77.2 0.962110960757781 237 54 96.2 0 1 711 159 395 UYL94495.1 MAG: RNA-dependent RNA polymerase [Leptosphaeria biglobosa deltaflexivirus 2] diamond 711 391 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae   Leptosphaeria biglobosa deltaflexivirus 2
31267213 31267213 PRJNA1016321_P_NODE_31875_length_320_cov_2.202429_g31644_i0 PRJNA1016321 31875 320 2.202429 7.0477728 Caudoviricetes sp. 2832643 Viruses Viruses 119 2.5199999999999997e-30   NR XOR12614.1 2832643 g31644 i0 63.2 0.815625 87 32 81.6 0 318 58 221 307 XOR12614.1 MAG: structural phage protein [Caudoviricetes sp.] diamond 261 119 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
31298752 31298752 PRJNA1016321_P_NODE_32655_length_315_cov_3.508264_g32424_i0 PRJNA1016321 32655 315 3.508264 11.0510316 Bacillus phage Stills 1610833 Viruses Viruses 78.6 1.03e-14   NR YP_009196920.1 1610833 g32424 i0 77.8 0.866666666666667 45 10 42.9 0 8 142 267 311 YP_009196920.1 hypothetical protein CPT_Stills35 [Bacillus phage Stills] diamond 273 78.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Slashvirus Slashvirus stills
31362230 31362230 PRJNA1016321_P_NODE_12096_length_572_cov_4.843687_g11873_i0 PRJNA1016321 12096 572 4.843687 27.70588964 Tongren Botou tick virus 1 2972060 Viruses Viruses 310 2.78e-98   NR UYL95439.1 2972060 g11873 i0 79.9 0.965034965034965 184 37 96.5 0 3 554 454 637 UYL95439.1 MAG: RNA-dependent RNA polymerase [Tongren Botou tick virus 1] diamond 552 310 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Tongren Botou tick virus 1
32089623 32089623 PRJNA1016321_P_NODE_46498_length_255_cov_1.362637_g46267_i0 PRJNA1016321 46498 255 1.362637 3.47472435 Caudoviricetes sp. 2832643 Viruses Viruses 92.4 2.77e-20   NR XOR12615.1 2832643 g46267 i0 60 0.882352941176471 75 29 88.2 1 248 24 230 303 XOR12615.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 225 92.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
32469525 32469525 PRJNA1016321_P_NODE_1059_length_1694_cov_4.161012_g990_i0 PRJNA1016321 1059 1694 4.161012 70.48754328 Hebei tick virus 5 3371294 Viruses Viruses 140 1.1799999999999999e-31   NR XHY85222.1 3371294 g990 i0 29.4 1.56729634002361 445 285 75.3 10 1522 248 57 492 XHY85222.1 MAG: putative methyltransferase [Hebei tick virus 5] diamond 2655 140 1 Viruses               Hebei tick virus 5
32501181 32501181 PRJNA1016321_P_NODE_14719_length_512_cov_1.772210_g14490_i0 PRJNA1016321 14719 512 1.77221 9.0737152 Leptosphaeria biglobosa deltaflexivirus 2 2985705 Viruses Viruses 87.4 1.92e-16   NR UYL94495.1 2985705 g14490 i0 39 0.931640625 159 85 88.5 4 455 3 1 155 UYL94495.1 MAG: RNA-dependent RNA polymerase [Leptosphaeria biglobosa deltaflexivirus 2] diamond 477 87.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae   Leptosphaeria biglobosa deltaflexivirus 2
32532830 32532830 PRJNA1016321_P_NODE_32119_length_319_cov_1.252033_g31888_i0 PRJNA1016321 32119 319 1.252033 3.99398527 Suillus luteus botourmiavirus 1 3067802 Viruses Viruses 104 2.1099999999999998e-23   NR WLK77426.1 3067802 g31888 i0 49 1.89028213166144 100 51 94 0 301 2 52 151 WLK77426.1 RNA-dependent RNA polymerase [Suillus luteus botourmiavirus 1] diamond 603 104 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Suillus luteus botourmiavirus 1
32816098 32816098 PRJNA1016321_P_NODE_2700_length_1207_cov_7.227513_g2570_i0 PRJNA1016321 2700 1207 7.227513 87.23608191 Setosphaeria turcica polymycovirus 1 2925283 Viruses Viruses 371 4.999999999999999e-120   NR UMZ55612.1 2925283 g2570 i0 52.5 1.88152444076222 383 179 94.9 2 1151 6 21 401 UMZ55612.1 P3 [Setosphaeria turcica polymycovirus 1] diamond 2271 371 1 Viruses           Polymycoviridae Polymycovirus Setosphaeria turcica polymycovirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;