RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA1016321" and tax_phylum = "Chloroflexota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1016321 · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10362327 10362327 PRJNA1016321_P_NODE_10229_length_628_cov_3.120721_g10007_i0 PRJNA1016321 10229 628 3.120721 19.59812788 Chloroflexota bacterium 2026724 Bacteria Bacteria 365 6.84e-123   NR MEO8288921.1 2026724 g10007 i0 86.7 1.93949044585987 203 27 97 0 610 2 112 314 MEO8288921.1 nucleotide sugar dehydrogenase [Chloroflexota bacterium] diamond 1218 365 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
26591397 26591397 PRJNA1016321_P_NODE_18001_length_455_cov_3.523560_g17771_i0 PRJNA1016321 18001 455 3.52356 16.032198 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 61.6 9.31e-8   NR MBE0696636.1 2024896 g17771 i0 34.7 1.5956043956044 118 71 77.8 3 376 23 85 196 MBE0696636.1 DUF11 domain-containing protein [Anaerolineaceae bacterium] diamond 726 61.6 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
26741806 26741806 PRJNA1016321_P_NODE_52041_length_246_cov_0.890173_g51810_i0 PRJNA1016321 52041 246 0.890173 2.18982558 Chloroflexota 200795 Bacteria Bacteria 92.4 8.26e-20   NR MBU1660369.1 2026724 g51810 i0 63.9 3.9390243902439 83 29 100 1 1 246 28 110 MBU1660369.1 glycosyltransferase family 2 protein [Chloroflexota bacterium] diamond 969 93.2 0.991416309012876 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
26781785 26781785 PRJNA1016321_P_NODE_23481_length_386_cov_1.437700_g23250_i0 PRJNA1016321 23481 386 1.4377 5.549522 Chloroflexota bacterium 2026724 Bacteria Bacteria 177 1.29e-53   NR MDX2140239.1 2026724 g23250 i0 78.3 0.893782383419689 115 25 89.4 0 349 5 6 120 MDX2140239.1 cytochrome c oxidase subunit 3 [Chloroflexota bacterium] diamond 345 177 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28203262 28203262 PRJNA1016321_P_NODE_55406_length_242_cov_0.911243_g55175_i0 PRJNA1016321 55406 242 0.911243 2.20520806 Chloroflexota bacterium 2026724 Bacteria Bacteria 47 5e-4   NR MBI3966067.1 2026724 g55175 i0 55.3 0.471074380165289 38 17 47.1 0 115 2 4 41 MBI3966067.1 hypothetical protein [Chloroflexota bacterium] diamond 114 47 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28424629 28424629 PRJNA1016321_P_NODE_21346_length_410_cov_1.753709_g21115_i0 PRJNA1016321 21346 410 1.753709 7.1902069 Anaerolineae bacterium 2052143 Bacteria Bacteria 137 2.96e-36   NR MCC6615191.1 2052143 g21115 i0 60.5 3.6219512195122 124 47 90.7 1 373 2 1 122 MCC6615191.1 hypothetical protein [Anaerolineae bacterium] diamond 1485 137 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
28519348 28519348 PRJNA1016321_P_NODE_25607_length_366_cov_1.501706_g25376_i0 PRJNA1016321 25607 366 1.501706 5.49624396 Chloroflexota bacterium 2026724 Bacteria Bacteria 127 7.4699999999999984e-34   NR GIL13638.1 2026724 g25376 i0 62 1.54098360655738 92 35 75.4 0 3 278 134 225 GIL13638.1 MAG: hypothetical protein BroJett038_23580 [Chloroflexota bacterium] diamond 564 127 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28677205 28677205 PRJNA1016321_P_NODE_50507_length_248_cov_0.880000_g50276_i0 PRJNA1016321 50507 248 0.88 2.1824 Chloroflexota bacterium 2026724 Bacteria Bacteria 134 1.2899999999999998e-35   NR MBX6770575.1 2026724 g50276 i0 67.9 1.95967741935484 81 26 98 0 245 3 260 340 MBX6770575.1 beta-galactosidase [Chloroflexota bacterium] diamond 486 134 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28677206 28677206 PRJNA1016321_P_NODE_53407_length_244_cov_1.204678_g53176_i0 PRJNA1016321 53407 244 1.204678 2.93941432 Anaerolineae bacterium 2052143 Bacteria Bacteria 133 5.55e-35   NR MFN8372163.1 2052143 g53176 i0 85.2 1.99180327868852 81 12 99.6 0 2 244 296 376 MFN8372163.1 acyl-CoA dehydrogenase family protein [Anaerolineae bacterium] diamond 486 133 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
28803120 28803120 PRJNA1016321_P_NODE_15128_length_504_cov_1.897912_g14899_i0 PRJNA1016321 15128 504 1.897912 9.56547648 Anaerolineae bacterium 2052143 Bacteria Bacteria 123 3.4499999999999996e-30   NR MCC6615191.1 2052143 g14899 i0 48.7 0.904761904761905 152 75 89.9 2 3 455 151 300 MCC6615191.1 hypothetical protein [Anaerolineae bacterium] diamond 456 123 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
29561025 29561025 PRJNA1016321_P_NODE_18450_length_449_cov_1.228723_g18220_i0 PRJNA1016321 18450 449 1.228723 5.51696627 Chloroflexota bacterium 2026724 Bacteria Bacteria 230 7.96e-72   NR MEO8287270.1 2026724 g18220 i0 79.7 2.90645879732739 143 29 95.5 0 430 2 207 349 MEO8287270.1 galactokinase [Chloroflexota bacterium] diamond 1305 230 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29718788 29718788 PRJNA1016321_P_NODE_48670_length_250_cov_0.870056_g48439_i0 PRJNA1016321 48670 250 0.870056 2.17514 Candidatus Trichofilum aggregatum 3140686 Bacteria Bacteria 74.7 2.33e-13   NR MBK9050966.1 3140686 g48439 i0 56 0.9 75 29 90 1 249 25 2242 2312 MBK9050966.1 DUF4157 domain-containing protein [Candidatus Trichofilum aggregatum] diamond 225 74.7 1 Bacteria   Bacillati Chloroflexota Ardenticatenia Candidatus Promineifilales Candidatus Promineifilaceae Candidatus Trichofilum Candidatus Trichofilum aggregatum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;