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contig_metadata

21 rows where analysis = "diamond", bioproject = "PRJNA1013345" and tax_phylum = "Streptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 21 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1013345 · 21 ✖

analysis 1

  • diamond · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12911928 12911928 PRJNA1013345_P_NODE_25451_length_163_cov_0.879310_g25321_i0 PRJNA1013345 25451 163 0.87931 1.4332753 Setaria italica 4555 Plants Plants 103 6.529999999999999e-24   NR XP_022680992.1 4555 g25321 i0 79.6 2.98159509202454 54 11 99.4 0 2 163 1126 1179 XP_022680992.1 LOW QUALITY PROTEIN: uncharacterized protein LOC101759701, partial [Setaria italica] diamond 486 103 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Setaria Setaria italica
26749567 26749567 PRJNA1013345_P_NODE_25061_length_163_cov_1.758621_g24931_i0 PRJNA1013345 25061 163 1.758621 2.86655223 Cryptomeria japonica 3369 Plants Plants 62 1.93e-9   NR XP_057859694.2 3369 g24931 i0 71.4 0.901840490797546 49 7 77.3 1 36 161 137 185 XP_057859694.2 uncharacterized protein LOC131068522 isoform X3 [Cryptomeria japonica] diamond 147 62 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
28037938 28037938 PRJNA1013345_P_NODE_30485_length_158_cov_1.837838_g30355_i0 PRJNA1013345 30485 158 1.837838 2.90378404 Trifolium 3898 Plants Plants 52 6.33e-6   NR KAK2368679.1 3899 g30355 i0 42.3 6.91139240506329 52 30 98.7 0 156 1 596 647 KAK2368679.1 bromodomain-containing protein [Trifolium repens] diamond 1092 52 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Trifolium Trifolium repens
28519341 28519341 PRJNA1013345_P_NODE_14807_length_183_cov_1.375000_g14677_i0 PRJNA1013345 14807 183 1.375 2.51625 Cryptomeria japonica 3369 Plants Plants 60.8 6.7e-9   NR XP_057826909.2 3369 g14677 i0 64.9 1.18032786885246 37 13 60.7 0 163 53 78 114 XP_057826909.2 protein transport protein SEC23 G [Cryptomeria japonica] diamond 216 60.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
28985356 28985356 PRJNA1013345_P_NODE_28308_length_160_cov_1.805310_g28178_i0 PRJNA1013345 28308 160 1.80531 2.888496 Lolium 4520 Plants Plants 98.2 3.58e-22   NR XP_051221032.1 4522 g28178 i0 92.5 4.96875 53 4 99.4 0 160 2 1142 1194 XP_051221032.1 uncharacterized protein LOC127339195 [Lolium perenne] diamond 795 98.6 0.995943204868154 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Lolium Lolium perenne
28985357 28985357 PRJNA1013345_P_NODE_29348_length_159_cov_1.821429_g29218_i0 PRJNA1013345 29348 159 1.821429 2.89607211 Lolium 4520 Plants Plants 87.8 1.54e-18   NR KAK1608478.1 4521 g29218 i0 86.5 4.90566037735849 52 7 98.1 0 3 158 370 421 KAK1608478.1 hypothetical protein QYE76_032151 [Lolium multiflorum] diamond 780 87.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Lolium Lolium multiflorum
29182456 29182456 PRJNA1013345_P_NODE_20689_length_170_cov_1.365854_g20559_i0 PRJNA1013345 20689 170 1.365854 2.3219518 Hordeum vulgare subsp. vulgare 112509 Plants Plants 46.6 5.96e-4   NR XP_044971996.1 112509 g20559 i0 55.2 1.02352941176471 58 23 97.1 1 1 165 169 226 XP_044971996.1 uncharacterized protein LOC123439332 [Hordeum vulgare subsp. vulgare] diamond 174 46.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
29214083 29214083 PRJNA1013345_P_NODE_30569_length_158_cov_1.837838_g30439_i0 PRJNA1013345 30569 158 1.837838 2.90378404 Gossypium anomalum 47600 Plants Plants 45.8 9.63e-4   NR KAG8478880.1 47600 g30439 i0 37.5 2.77215189873418 48 30 91.1 0 7 150 66 113 KAG8478880.1 hypothetical protein CXB51_028735 [Gossypium anomalum] diamond 438 45.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Gossypium Gossypium anomalum
29497982 29497982 PRJNA1013345_P_NODE_23570_length_165_cov_0.864407_g23440_i0 PRJNA1013345 23570 165 0.864407 1.42627155 Triticum aestivum 4565 Plants Plants 45.8 0.00105   NR BDI54558.1 4565 g23440 i0 51.9 0.981818181818182 54 23 98.2 1 2 163 432 482 BDI54558.1 retrotransposon protein, putative, Ty3-gypsy subclass [Triticum aestivum] diamond 162 45.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
29592351 29592351 PRJNA1013345_P_NODE_27830_length_161_cov_0.894737_g27700_i0 PRJNA1013345 27830 161 0.894737 1.44052657 Lolium multiflorum 4521 Plants Plants 99.8 7.42e-23   NR KAK1626726.1 4521 g27700 i0 100 17.776397515528 53 0 98.8 0 161 3 196 248 KAK1626726.1 hypothetical protein QYE76_001041 [Lolium multiflorum] diamond 2862 99.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Lolium Lolium multiflorum
30635019 30635019 PRJNA1013345_P_NODE_19233_length_173_cov_1.619048_g19103_i0 PRJNA1013345 19233 173 1.619048 2.80095304 Tetracentron sinense 13715 Plants Plants 100 6.57e-23   NR KAF8402079.1 13715 g19103 i0 73.7 1.97687861271676 57 15 98.8 0 171 1 502 558 KAF8402079.1 hypothetical protein HHK36_013031 [Tetracentron sinense] diamond 342 100 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Trochodendrales Trochodendraceae Tetracentron Tetracentron sinense
30856311 30856311 PRJNA1013345_P_NODE_23254_length_165_cov_1.305085_g23124_i0 PRJNA1013345 23254 165 1.305085 2.15339025 Sesamum indicum 4182 Plants Plants 65.5 1.17e-10   NR XP_011075308.1 4182 g23124 i0 70 3.74545454545455 40 11 72.7 1 134 15 19 57 XP_011075308.1 uncharacterized protein LOC105159808 [Sesamum indicum] diamond 618 65.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Pedaliaceae Sesamum Sesamum indicum
30951336 30951336 PRJNA1013345_P_NODE_9474_length_208_cov_3.273292_g9344_i0 PRJNA1013345 9474 208 3.273292 6.80844736 Cannabis sativa 3483 Plants Plants 46.6 0.00105   NR KAF4368741.1 3483 g9344 i0 39.3 2.63942307692308 61 28 77.9 2 43 204 485 543 KAF4368741.1 hypothetical protein G4B88_003614 [Cannabis sativa] diamond 549 46.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Cannabis Cannabis sativa
31741469 31741469 PRJNA1013345_P_NODE_32797_length_155_cov_4.833333_g32667_i0 PRJNA1013345 32797 155 4.833333 7.49166615 Stephania cephalantha 152367 Plants Plants 78.2 2.78e-17   NR KAK9120000.1 152367 g32667 i0 74 11.5741935483871 50 13 96.8 0 6 155 30 79 KAK9120000.1 hypothetical protein Scep_018093 [Stephania cephalantha] diamond 1794 78.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ranunculales Menispermaceae Stephania Stephania cephalantha
31986780 31986780 PRJNA1013345_P_NODE_30538_length_158_cov_1.837838_g30408_i0 PRJNA1013345 30538 158 1.837838 2.90378404 Magnoliopsida 3398 Plants Plants 51.2 1.19e-5   NR XP_052181862.1 55363 g30408 i0 70 2.84810126582278 30 9 57 0 3 92 190 219 XP_052181862.1 glycerophosphodiester phosphodiesterase GDPDL6-like [Diospyros lotus] diamond 450 51.6 0.992248062015504 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Ebenaceae Diospyros Diospyros lotus
32026350 32026350 PRJNA1013345_P_NODE_31998_length_157_cov_0.927273_g31868_i0 PRJNA1013345 31998 157 0.927273 1.45581861 Medicago truncatula 3880 Plants Plants 44.3 0.00309   NR KEH15938.1 3880 g31868 i0 70.4 0.515923566878981 27 8 51.6 0 72 152 22 48 KEH15938.1 endonuclease/exonuclease/phosphatase family protein [Medicago truncatula] diamond 81 44.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Medicago Medicago truncatula
32057934 32057934 PRJNA1013345_P_NODE_27678_length_161_cov_0.894737_g27548_i0 PRJNA1013345 27678 161 0.894737 1.44052657 Taxus chinensis 29808 Plants Plants 46.6 5.36e-4   NR KAH9291031.1 29808 g27548 i0 51.2 0.801242236024845 43 21 80.1 0 2 130 838 880 KAH9291031.1 hypothetical protein KI387_044160 [Taxus chinensis] diamond 129 46.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Taxaceae Taxus Taxus chinensis
32311418 32311418 PRJNA1013345_P_NODE_27539_length_161_cov_0.894737_g27409_i0 PRJNA1013345 27539 161 0.894737 1.44052657 Solanum lycopersicum 4081 Plants Plants 48.5 7.54e-5   NR XP_069152831.1 4081 g27409 i0 52.4 0.782608695652174 42 20 78.3 0 145 20 139 180 XP_069152831.1 uncharacterized protein [Solanum lycopersicum] diamond 126 48.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum lycopersicum
32437917 32437917 PRJNA1013345_P_NODE_22719_length_166_cov_1.184874_g22589_i0 PRJNA1013345 22719 166 1.184874 1.96689084 Sesbania bispinosa 485725 Plants Plants 38.9 0.0408   NR KAJ1442485.1 485725 g22589 i0 65 0.36144578313253 20 7 36.1 0 38 97 1 20 KAJ1442485.1 putative arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing [Sesbania bispinosa] diamond 60 38.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Sesbania Sesbania bispinosa
32753168 32753168 PRJNA1013345_P_NODE_19300_length_173_cov_1.388889_g19170_i0 PRJNA1013345 19300 173 1.388889 2.40277797 Lolium multiflorum 4521 Plants Plants 105 1.57e-24   NR KAK1660476.1 4521 g19170 i0 93 6.90173410404624 57 4 98.8 0 173 3 1779 1835 KAK1660476.1 hypothetical protein QYE76_048635 [Lolium multiflorum] diamond 1194 105 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Lolium Lolium multiflorum
32784538 32784538 PRJNA1013345_P_NODE_32480_length_157_cov_0.927273_g32350_i0 PRJNA1013345 32480 157 0.927273 1.45581861 Tetracentron sinense 13715 Plants Plants 41.2 0.0414   NR KAF8369441.1 13715 g32350 i0 67.7 0.592356687898089 31 7 53.5 1 1 84 433 463 KAF8369441.1 hypothetical protein HHK36_032542 [Tetracentron sinense] diamond 93 41.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Trochodendrales Trochodendraceae Tetracentron Tetracentron sinense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;