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contig_metadata

17 rows where analysis = "diamond", bioproject = "PRJNA1013345" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 17 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1013345 · 17 ✖

analysis 1

  • diamond · 17 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19283727 19283727 PRJNA1013345_P_NODE_11676_length_194_cov_2.666667_g11546_i0 PRJNA1013345 11676 194 2.666667 5.17333398 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 125 2.17e-32   NR MEX1022268.1 2026734 g11546 i0 93.8 3.01546391752577 65 2 97.4 1 2 190 327 391 MEX1022268.1 cysteine desulfurase [Dehalococcoidia bacterium] diamond 585 125 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
22679293 22679293 PRJNA1013345_P_NODE_18618_length_174_cov_2.409449_g18488_i0 PRJNA1013345 18618 174 2.409449 4.19244126 Bacteria 2 Bacteria Bacteria 127 2.0899999999999997e-35   NR MBA3449709.1 2448782 g18488 i0 94.8 24 58 3 100 0 174 1 88 145 MBA3449709.1 phenylalanine--tRNA ligase subunit alpha [Chloroflexia bacterium] diamond 4176 128 0.9921875 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
26749566 26749566 PRJNA1013345_P_NODE_24701_length_164_cov_0.871795_g24571_i0 PRJNA1013345 24701 164 0.871795 1.4297438 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 79.7 1.17e-15   NR HYI22202.1 2952938 g24571 i0 78.4 0.932926829268293 51 11 93.3 0 154 2 366 416 HYI22202.1 DNA internalization-related competence protein ComEC/Rec2 [Candidatus Limnocylindrales bacterium] diamond 153 79.7 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
26845226 26845226 PRJNA1013345_P_NODE_13561_length_186_cov_1.143885_g13431_i0 PRJNA1013345 13561 186 1.143885 2.1276261 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 58.9 2.64e-8   NR HEY4684734.1 2026734 g13431 i0 61.5 1.67741935483871 52 13 83.9 1 30 185 170 214 HEY4684734.1 PHP domain-containing protein [Dehalococcoidia bacterium] diamond 312 58.9 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
26845227 26845227 PRJNA1013345_P_NODE_21161_length_169_cov_1.418033_g21031_i0 PRJNA1013345 21161 169 1.418033 2.39647577 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 93.6 7.12e-22   NR HXH20850.1 2026734 g21031 i0 76.4 3.90532544378698 55 13 97.6 0 167 3 4 58 HXH20850.1 TrkA family potassium uptake protein [Dehalococcoidia bacterium] diamond 660 93.6 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
26939798 26939798 PRJNA1013345_P_NODE_13422_length_186_cov_1.467626_g13292_i0 PRJNA1013345 13422 186 1.467626 2.72978436 Ktedonosporobacter rubrisoli 2509675 Bacteria Bacteria 42.4 0.0229   NR WP_165422824.1 2509675 g13292 i0 39.3 0.903225806451613 56 33 90.3 1 9 176 40 94 WP_165422824.1 CPBP family intramembrane glutamic endopeptidase [Ktedonosporobacter rubrisoli] diamond 168 42.4 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales Ktedonosporobacteraceae Ktedonosporobacter Ktedonosporobacter rubrisoli
27603784 27603784 PRJNA1013345_P_NODE_17924_length_176_cov_1.581395_g17794_i0 PRJNA1013345 17924 176 1.581395 2.7832552 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 110 1.7500000000000002e-26   NR HEV8402523.1 2952938 g17794 i0 86.2 7.85795454545455 58 8 98.9 0 3 176 211 268 HEV8402523.1 MDR family MFS transporter [Candidatus Limnocylindrales bacterium] diamond 1383 110 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
28077084 28077084 PRJNA1013345_P_NODE_31045_length_158_cov_0.918919_g30915_i0 PRJNA1013345 31045 158 0.918919 1.45189202 Candidatus Limnocylindria bacterium 3047546 Bacteria Bacteria 89.7 1.78e-19   NR HEX2193820.1 3047546 g30915 i0 80.8 0.987341772151899 52 10 98.7 0 156 1 51 102 HEX2193820.1 ABC transporter permease [Candidatus Limnocylindria bacterium] diamond 156 89.7 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria       Candidatus Limnocylindria bacterium
28266404 28266404 PRJNA1013345_P_NODE_16206_length_180_cov_1.060150_g16076_i0 PRJNA1013345 16206 180 1.06015 1.90827 Anaerolineae bacterium 2052143 Bacteria Bacteria 42.7 0.0156   NR HEY71228.1 2052143 g16076 i0 42.6 0.783333333333333 47 24 73.3 1 29 160 33 79 HEY71228.1 4Fe-4S binding protein [Anaerolineae bacterium] diamond 141 42.7 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
28392913 28392913 PRJNA1013345_P_NODE_24946_length_163_cov_2.241379_g24816_i0 PRJNA1013345 24946 163 2.241379 3.65344777 Chloroflexota bacterium 2026724 Bacteria Bacteria 90.5 1.54e-19   NR MDQ3524265.1 2026724 g24816 i0 77.8 0.993865030674847 54 12 99.4 0 2 163 401 454 MDQ3524265.1 FAD-binding oxidoreductase [Chloroflexota bacterium] diamond 162 90.5 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29024777 29024777 PRJNA1013345_P_NODE_19708_length_172_cov_1.576000_g19578_i0 PRJNA1013345 19708 172 1.576 2.71072 Chloroflexota bacterium 2026724 Bacteria Bacteria 41.2 0.0423   NR MCC6176415.1 2026724 g19578 i0 47.2 0.924418604651163 53 25 92.4 1 10 168 42 91 MCC6176415.1 hypothetical protein [Chloroflexota bacterium] diamond 159 41.2 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29782153 29782153 PRJNA1013345_P_NODE_14491_length_183_cov_9.316176_g14361_i0 PRJNA1013345 14491 183 9.316176 17.04860208 uncultured Chloroflexota bacterium 166587 Bacteria Bacteria 41.6 0.0445   NR CAA9302627.1 166587 g14361 i0 41.9 0.704918032786885 43 22 70.5 1 7 135 304 343 CAA9302627.1 MAG: hypothetical protein AVDCRST_MAG77-5794 [uncultured Chloroflexota bacterium] diamond 129 41.6 1 Bacteria   Bacillati Chloroflexota         uncultured Chloroflexota bacterium
29877036 29877036 PRJNA1013345_P_NODE_30551_length_158_cov_1.837838_g30421_i0 PRJNA1013345 30551 158 1.837838 2.90378404 Ardenticatenaceae bacterium 2614247 Bacteria Bacteria 80.5 5.74e-16   NR HEX8681913.1 2614247 g30421 i0 78.8 1.9746835443038 52 11 98.7 0 158 3 463 514 HEX8681913.1 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein [Ardenticatenaceae bacterium] diamond 312 80.5 1 Bacteria   Bacillati Chloroflexota Ardenticatenia Ardenticatenales Ardenticatenaceae   Ardenticatenaceae bacterium
31362220 31362220 PRJNA1013345_P_NODE_17056_length_178_cov_1.404580_g16926_i0 PRJNA1013345 17056 178 1.40458 2.5001524 Candidatus Limnocylindria bacterium 3047546 Bacteria Bacteria 70.5 2.61e-12   NR HJP70109.1 3047546 g16926 i0 69.5 0.99438202247191 59 18 99.4 0 178 2 871 929 HJP70109.1 adenylate/guanylate cyclase domain-containing protein [Candidatus Limnocylindria bacterium] diamond 177 70.5 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria       Candidatus Limnocylindria bacterium
31362221 31362221 PRJNA1013345_P_NODE_17456_length_177_cov_1.569231_g17326_i0 PRJNA1013345 17456 177 1.569231 2.77753887 Candidatus Limnocylindria bacterium 3047546 Bacteria Bacteria 62.8 1.26e-9   NR HET9498448.1 3047546 g17326 i0 66.7 0.76271186440678 45 15 76.3 0 39 173 1 45 HET9498448.1 adenylate/guanylate cyclase domain-containing protein [Candidatus Limnocylindria bacterium] diamond 135 62.8 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria       Candidatus Limnocylindria bacterium
31386041 31386041 PRJNA1013345_P_NODE_20436_length_170_cov_2.682927_g20306_i0 PRJNA1013345 20436 170 2.682927 4.5609759 Bacteria 2 Bacteria Bacteria 77 1.03e-14   NR MDP9356711.1 2026724 g20306 i0 80 1.58823529411765 45 9 79.4 0 137 3 1 45 MDP9356711.1 adenosylhomocysteinase [Chloroflexota bacterium] diamond 270 77 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31646526 31646526 PRJNA1013345_P_NODE_30117_length_159_cov_0.910714_g29987_i0 PRJNA1013345 30117 159 0.910714 1.44803526 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 112 1.5600000000000002e-27   NR HET9852287.1 2952938 g29987 i0 96.2 1 53 2 100 0 1 159 135 187 HET9852287.1 NAD(P)-binding domain-containing protein [Candidatus Limnocylindrales bacterium] diamond 159 112 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;