contig_metadata
6 rows where analysis = "diamond", bioproject = "PRJNA1013345" and tax_clade = "Sar"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7811047 | 7811047 | PRJNA1013345_P_NODE_33567_length_152_cov_4.161905_g33437_i0 | PRJNA1013345 | 33567 | 152 | 4.161905 | 6.3260956 | Paramecium tetraurelia | 5888 | SAR_Eukaryotes | SAR_Eukaryotes | 76.3 | 1.63e-14 | NR | XP_001439451.1 | 5888 | g33437 | i0 | 70 | 2.84210526315789 | 50 | 15 | 98.7 | 0 | 1 | 150 | 389 | 438 | XP_001439451.1 uncharacterized protein GSPATT00008533001 [Paramecium tetraurelia] | diamond | 432 | 76.3 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Peniculida | Parameciidae | Paramecium | Paramecium tetraurelia | ||
| 28637956 | 28637956 | PRJNA1013345_P_NODE_18187_length_175_cov_2.390625_g18057_i0 | PRJNA1013345 | 18187 | 175 | 2.390625 | 4.18359375 | Peronosporaceae | 4777 | SAR_Eukaryotes | SAR_Eukaryotes | 50.4 | 2.7e-5 | NR | XP_067781628.1 | 4785 | g18057 | i0 | 81.3 | 16.2342857142857 | 32 | 6 | 54.9 | 0 | 3 | 98 | 165 | 196 | XP_067781628.1 Copia proteinlike [Phytophthora cinnamomi] | diamond | 2841 | 50.4 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 28771759 | 28771759 | PRJNA1013345_P_NODE_4247_length_289_cov_4.851240_g4118_i0 | PRJNA1013345 | 4247 | 289 | 4.85124 | 14.0200836 | Cladocopium goreaui | 2562237 | SAR_Eukaryotes | SAR_Eukaryotes | 44.3 | 0.0183 | NR | CAL1153044.1 | 2562237 | g4118 | i0 | 40.4 | 0.487889273356401 | 47 | 28 | 48.8 | 0 | 59 | 199 | 86 | 132 | CAL1153044.1 unnamed protein product [Cladocopium goreaui] | diamond | 141 | 44.3 | 1 | Eukaryota | Sar | Dinophyceae | Suessiales | Symbiodiniaceae | Cladocopium | Cladocopium goreaui | |||
| 31172036 | 31172036 | PRJNA1013345_P_NODE_30475_length_158_cov_1.837838_g30345_i0 | PRJNA1013345 | 30475 | 158 | 1.837838 | 2.90378404 | Cylindrotheca closterium | 2856 | SAR_Eukaryotes | SAR_Eukaryotes | 66.2 | 5.95e-11 | NR | CAJ1946243.1 | 2856 | g30345 | i0 | 67.3 | 1.93670886075949 | 52 | 16 | 98.7 | 1 | 2 | 157 | 355 | 405 | CAJ1946243.1 unnamed protein product [Cylindrotheca closterium] | diamond | 306 | 66.2 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Cylindrotheca | Cylindrotheca closterium | ||
| 31520341 | 31520341 | PRJNA1013345_P_NODE_31176_length_158_cov_0.918919_g31046_i0 | PRJNA1013345 | 31176 | 158 | 0.918919 | 1.45189202 | Ochromonadaceae sp. CCMP2298 | 483371 | SAR_Eukaryotes | SAR_Eukaryotes | 74.7 | 6.19e-14 | NR | KAJ1420394.1 | 483371 | g31046 | i0 | 62.7 | 0.968354430379747 | 51 | 19 | 96.8 | 0 | 1 | 153 | 555 | 605 | KAJ1420394.1 hypothetical protein B484DRAFT_453130 [Ochromonadaceae sp. CCMP2298] | diamond | 153 | 74.7 | 1 | Eukaryota | Sar | Synurophyceae | Ochromonadales | Ochromonadaceae | Ochromonadaceae sp. CCMP2298 | ||||
| 32311419 | 32311419 | PRJNA1013345_P_NODE_28999_length_160_cov_0.902655_g28869_i0 | PRJNA1013345 | 28999 | 160 | 0.902655 | 1.444248 | Seminavis robusta | 568900 | SAR_Eukaryotes | SAR_Eukaryotes | 105 | 6.81e-25 | NR | CAB9506846.1 | 568900 | g28869 | i0 | 97.8 | 0.8625 | 46 | 1 | 86.3 | 0 | 138 | 1 | 298 | 343 | CAB9506846.1 protein ligase MARCH7 [Seminavis robusta] | diamond | 138 | 105 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Naviculales | Naviculaceae | Seminavis | Seminavis robusta |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;