RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1011844" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1011844 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12910438 12910438 PRJNA1011844_P_NODE_27671_length_1017_cov_8.895127_g21299_i0 PRJNA1011844 27671 1017 8.895127 90.46344159 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 145 2.32e-36   NR MBN1516326.1 2107588 g21299 i0 51.4 1.28613569321534 146 71 43.1 0 440 3 24 169 MBN1516326.1 ABC transporter substrate-binding protein [Candidatus Sumerlaeota bacterium] diamond 1308 145 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
15459298 15459298 PRJNA1011844_P_NODE_19353_length_1278_cov_17.788382_g14402_i0 PRJNA1011844 19353 1278 17.788382 227.33552196 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 146 6.15e-36   NR MBN1516326.1 2107588 g14402 i0 48.8 0.394366197183099 168 82 39 2 779 1276 4 169 MBN1516326.1 ABC transporter substrate-binding protein [Candidatus Sumerlaeota bacterium] diamond 504 146 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
31393803 31393803 PRJNA1011844_P_NODE_49696_length_630_cov_5.188510_g41460_i0 PRJNA1011844 49696 630 5.18851 32.687613 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 47.8 0.0128   NR HPB30789.1 2107588 g41460 i0 25 0.59047619047619 124 80 57.6 3 93 455 83 196 HPB30789.1 4Fe-4S dicluster domain-containing protein [Candidatus Sumerlaeota bacterium] diamond 372 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;