RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1011844" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1011844 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27698537 27698537 PRJNA1011844_P_NODE_146164_length_251_cov_0.865169_g137585_i0 PRJNA1011844 146164 251 0.865169 2.17157419 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 50.4 1.06e-5   NR HET7152959.1 2447898 g137585 i0 48.9 3.58565737051793 45 23 53.8 0 236 102 48 92 HET7152959.1 ankyrin repeat domain-containing protein [Candidatus Kapaibacterium sp.] diamond 900 50.4 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29332373 29332373 PRJNA1011844_P_NODE_20229_length_1246_cov_18.410060_g6996_i1 PRJNA1011844 20229 1246 18.41006 229.3893476 Pseudomonadati 3379134 Bacteria Bacteria 90.5 8.29e-16   NR HEY3873888.1 2447898 g6996 i1 28 2.0008025682183 279 147 66.2 9 963 139 26 254 HEY3873888.1 aminotransferase class V-fold PLP-dependent enzyme [Candidatus Kapaibacterium sp.] diamond 2493 90.5 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
31171914 31171914 PRJNA1011844_P_NODE_155175_length_245_cov_0.895349_g146595_i0 PRJNA1011844 155175 245 0.895349 2.19360505 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 42.7 0.0363   NR TAE33688.1 2447898 g146595 i0 40 0.857142857142857 70 30 71 3 176 3 186 255 TAE33688.1 MAG: hypothetical protein EAZ92_00500 [Candidatus Kapaibacterium sp.] diamond 210 42.7 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
32753017 32753017 PRJNA1011844_P_NODE_10580_length_1745_cov_17.208732_g7557_i0 PRJNA1011844 10580 1745 17.208732 300.2923734 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 78.6 4e-11   NR MFN8360780.1 2447898 g7557 i0 26 0.489971346704871 285 158 48.8 9 683 1534 421 653 MFN8360780.1 adenylate/guanylate cyclase domain-containing protein [Candidatus Kapaibacterium sp.] diamond 855 78.6 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;