RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1011844" and tax_phylum = "Candidatus Handelsmaniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Handelsmaniibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1011844 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27097986 27097986 PRJNA1011844_P_NODE_69822_length_455_cov_1.890052_g61352_i0 PRJNA1011844 69822 455 1.890052 8.5997366 Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_1 2099671 Bacteria Bacteria 120 2.79e-28   NR OGG44698.1 1817868 g61352 i0 45.9 5.84175824175824 148 80 97.6 0 454 11 607 754 OGG44698.1 MAG: hypothetical protein A3F84_28760 [Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10] diamond 2658 120 1 Bacteria Bacteria candidate phyla   Candidatus Handelsmaniibacteriota         Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10
30508670 30508670 PRJNA1011844_P_NODE_123933_length_278_cov_1.268293_g115356_i0 PRJNA1011844 123933 278 1.268293 3.52585454 Candidatus Handelsmanbacteria bacterium 2099671 Bacteria Bacteria 44.7 0.00645   NR HIG55342.1 2099671 g115356 i0 32.2 0.938848920863309 87 50 93.9 4 269 9 70 147 HIG55342.1 GNAT family N-acetyltransferase [Candidatus Handelsmanbacteria bacterium] diamond 261 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Handelsmaniibacteriota         Candidatus Handelsmanbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;