RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1011844" and tax_phylum = "Candidatus Delongiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Delongiibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1011844 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29710880 29710880 PRJNA1011844_P_NODE_25350_length_1081_cov_12.785714_g13725_i1 PRJNA1011844 25350 1081 12.785714 138.21356834 Bacteria 2 Bacteria Bacteria 101 2.88e-20   NR MCB9474154.1 2044594 g13725 i1 76.8 0.985198889916744 56 13 15.5 0 1075 908 15 70 MCB9474154.1 NAD(P)-dependent alcohol dehydrogenase [Candidatus Delongbacteria bacterium] diamond 1065 102 0.990196078431373 Bacteria Bacteria candidate phyla   Candidatus Delongiibacteriota         Candidatus Delongbacteria bacterium
31354334 31354334 PRJNA1011844_P_NODE_18516_length_1313_cov_8.234677_g13725_i0 PRJNA1011844 18516 1313 8.234677 108.12130901 Bacteria 2 Bacteria Bacteria 101 7.74e-20   NR MCB9474154.1 2044594 g13725 i0 76.8 0.811119573495811 56 13 12.8 0 1307 1140 15 70 MCB9474154.1 NAD(P)-dependent alcohol dehydrogenase [Candidatus Delongbacteria bacterium] diamond 1065 102 0.990196078431373 Bacteria Bacteria candidate phyla   Candidatus Delongiibacteriota         Candidatus Delongbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;