RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1011833" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1011833 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29718604 29718604 PRJNA1011833_S_NODE_16710_length_296_cov_1.897233_g16290_i0 PRJNA1011833 16710 296 1.897233 5.61580968 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 45.4 0.0082   NR WFP52505.1 3063761 g16290 i0 38.6 0.841216216216216 83 46 80.1 3 268 32 765 846 WFP52505.1 RNA-dependent RNA polymerase [Hippocampus erectus picornavirus 1] diamond 249 45.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
32878858 32878858 PRJNA1011833_S_NODE_41060_length_181_cov_3.347826_g40640_i0 PRJNA1011833 41060 181 3.347826 6.05956506 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 63.9 5.54e-10   NR AVM87439.1 3063761 g40640 i0 52.4 1.04419889502762 63 27 99.4 1 1 180 457 519 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 189 63.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;