RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1011833" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1011833 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29718607 29718607 PRJNA1011833_S_NODE_22830_length_250_cov_3.425121_g22410_i0 PRJNA1011833 22830 250 3.425121 8.5628025 Rozella allomycis CSF55 988480 Fungi Fungi 94.4 2.73e-20   NR EPZ36416.1 988480 g22410 i0 51.8 0.996 83 40 99.6 0 1 249 88 170 EPZ36416.1 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 domain-containing protein [Rozella allomycis CSF55] diamond 249 94.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32815907 32815907 PRJNA1011833_S_NODE_11960_length_344_cov_4.720930_g11540_i0 PRJNA1011833 11960 344 4.72093 16.2399992 Rozella allomycis CSF55 988480 Fungi Fungi 96.7 2.8700000000000003e-21   NR EPZ31697.1 988480 g11540 i0 50 1.96220930232558 114 48 98.5 2 2 340 209 314 EPZ31697.1 UPF0103/Mediator of ErbB2-driven cell motility domain-containing protein [Rozella allomycis CSF55] diamond 675 96.7 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;