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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA1011833" and tax_clade = "FCB group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • FCB group · 9 ✖

bioproject 1

  • PRJNA1011833 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4829585 4829585 PRJNA1011833_S_NODE_16124_length_301_cov_2.093023_g15704_i0 PRJNA1011833 16124 301 2.093023 6.29999923 Bacteroidales bacterium 2030927 Bacteria Bacteria 111 1.6300000000000002e-27   NR NLV37679.1 2030927 g15704 i0 58 0.877076411960133 88 37 87.7 0 3 266 166 253 NLV37679.1 glucosamine-6-phosphate deaminase [Bacteroidales bacterium] diamond 264 111 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
26591213 26591213 PRJNA1011833_S_NODE_33981_length_201_cov_1.177215_g33561_i0 PRJNA1011833 33981 201 1.177215 2.36620215 Flavipsychrobacter sp. 2307286 Bacteria Bacteria 42.4 0.0287   NR MCW3123626.1 2307286 g33561 i0 42.2 0.671641791044776 45 26 67.2 0 145 11 190 234 MCW3123626.1 O-antigen ligase protein [Flavipsychrobacter sp.] diamond 135 42.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Flavipsychrobacter Flavipsychrobacter sp.
27635099 27635099 PRJNA1011833_S_NODE_16644_length_296_cov_4.750988_g16224_i0 PRJNA1011833 16644 296 4.750988 14.06292448 Flavobacteriaceae bacterium 1871037 Bacteria Bacteria 100 1.2800000000000001e-22   NR MDC0637698.1 1871037 g16224 i0 49.5 2.83783783783784 95 48 96.3 0 296 12 293 387 MDC0637698.1 proline dehydrogenase family protein [Flavobacteriaceae bacterium] diamond 840 100 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae   Flavobacteriaceae bacterium
28140416 28140416 PRJNA1011833_S_NODE_38085_length_189_cov_0.986301_g37665_i0 PRJNA1011833 38085 189 0.986301 1.86410889 Flavobacteriia bacterium 2044941 Bacteria Bacteria 42 0.0306   NR NBX38946.1 2044941 g37665 i0 50 0.857142857142857 54 25 84.1 2 3 161 172 224 NBX38946.1 lycopene cyclase domain-containing protein [Flavobacteriia bacterium] diamond 162 42 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia       Flavobacteriia bacterium
29465863 29465863 PRJNA1011833_S_NODE_10130_length_368_cov_8.286154_g9712_i0 PRJNA1011833 10130 368 8.286154 30.49304672 Roseivirga sp. 1964215 Bacteria Bacteria 51.6 1.1e-4   NR MFT6053375.1 1964215 g9712 i0 48 2.58423913043478 50 25 40.8 1 13 162 373 421 MFT6053375.1 putative AlkP superfamily pyrophosphatase or phosphodiesterase [Roseivirga sp.] diamond 951 51.6 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Roseivirgaceae Roseivirga Roseivirga sp.
30224173 30224173 PRJNA1011833_S_NODE_37712_length_190_cov_1.061224_g37292_i0 PRJNA1011833 37712 190 1.061224 2.0163256 Bacteroidota bacterium 1898104 Bacteria Bacteria 43.1 0.0139   NR KAA3622062.1 1898104 g37292 i0 41 0.615789473684211 39 23 61.6 0 5 121 734 772 KAA3622062.1 MAG: hypothetical protein DWQ02_26710 [Bacteroidota bacterium] diamond 117 43.1 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
30627236 30627236 PRJNA1011833_S_NODE_20673_length_265_cov_1.824324_g20253_i0 PRJNA1011833 20673 265 1.824324 4.8344586 Pseudomonadati 3379134 Bacteria Bacteria 121 1.2399999999999998e-29   NR MBL7850048.1 2099675 g20253 i0 66.3 4.77735849056604 80 27 90.6 0 241 2 857 936 MBL7850048.1 aminomethyl-transferring glycine dehydrogenase [Cyclobacteriaceae bacterium] diamond 1266 121 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cyclobacteriaceae   Cyclobacteriaceae bacterium
31804579 31804579 PRJNA1011833_S_NODE_1937_length_639_cov_52.954698_g1598_i0 PRJNA1011833 1937 639 52.954698 338.38052022 Candidatus Aegiribacteria sp. 2528271 Bacteria Bacteria 94.7 1.7400000000000003e-21   NR MFO8183585.1 2528271 g1598 i0 57.7 1.15023474178404 78 33 36.6 0 588 355 2 79 MFO8183585.1 RNA-binding protein [Candidatus Aegiribacteria sp.] diamond 735 94.7 1 Bacteria FCB group Pseudomonadati         Candidatus Aegiribacteria Candidatus Aegiribacteria sp.
32839697 32839697 PRJNA1011833_S_NODE_49560_length_164_cov_1.975207_g49140_i0 PRJNA1011833 49560 164 1.975207 3.23933948 Bacteria 2 Bacteria Bacteria 86.7 3.82e-18   NR WP_014224542.1 28112 g49140 i0 69.8 20.359756097561 53 16 97 0 159 1 84 136 WP_014224542.1 adenosylhomocysteinase [Tannerella forsythia] diamond 3339 86.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Tannerella Tannerella forsythia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;