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contig_metadata

27 rows where analysis = "diamond", bioproject = "PRJNA1011833" and tax_clade = "Embryophyta"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 27 ✖

bioproject 1

  • PRJNA1011833 · 27 ✖

analysis 1

  • diamond · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11633971 11633971 PRJNA1011833_S_NODE_25570_length_235_cov_1.750000_g25150_i0 PRJNA1011833 25570 235 1.75 4.1125 Eukaryota 2759 Plants Plants 149 1.31e-44   NR NP_001077473.1 3702 g25150 i0 91.5 143.246808510638 71 6 90.6 0 233 21 39 109 NP_001077473.1 PHF5-like protein [Arabidopsis thaliana] diamond 33663 150 0.993333333333333 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
11634155 11634155 PRJNA1011833_S_NODE_7070_length_418_cov_7.578667_g6654_i0 PRJNA1011833 7070 418 7.578667 31.67882806 Eukaryota 2759 Plants Plants 81.6 4.3e-16   NR KAJ3675634.1 13579 g6654 i0 64.9 2.64114832535885 57 20 40.9 0 418 248 87 143 KAJ3675634.1 hypothetical protein LUZ60_004676 [Juncus effusus] diamond 1104 82.4 0.990291262135922 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Juncaceae Juncus Juncus effusus
15458145 15458145 PRJNA1011833_S_NODE_5633_length_449_cov_27.300493_g5221_i0 PRJNA1011833 5633 449 27.300493 122.57921357 Eukaryota 2759 Plants Plants 220 3.72e-68   NR XP_022154562.1 3673 g5221 i0 91.4 963.581291759465 128 11 85.5 0 449 66 9 136 XP_022154562.1 uncharacterized protein LOC111021800 [Momordica charantia] diamond 432648 222 0.990990990990991 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Momordica Momordica charantia
18007338 18007338 PRJNA1011833_S_NODE_8255_length_396_cov_12.152975_g7838_i0 PRJNA1011833 8255 396 12.152975 48.125781 Sphagnum tenellum 128247 Plants Plants 120 3.729999999999999e-32   NR CAM6054793.1 128247 g7838 i0 51.8 3.32575757575758 110 52 83.3 1 394 65 34 142 CAM6054793.1 unnamed protein product [Sphagnum tenellum] diamond 1317 120 1 Eukaryota Embryophyta Viridiplantae Streptophyta Sphagnopsida Sphagnales Sphagnaceae Sphagnum Sphagnum tenellum
21832254 21832254 PRJNA1011833_S_NODE_44618_length_174_cov_1.099237_g44198_i0 PRJNA1011833 44618 174 1.099237 1.91267238 Eukaryota 2759 Plants Plants 93.6 1.85e-20   NR KAH7280799.1 49495 g44198 i0 74.1 10.8448275862069 58 15 100 0 174 1 501 558 KAH7280799.1 hypothetical protein KP509_36G014900 [Ceratopteris richardii] diamond 1887 93.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Polypodiopsida Polypodiales Pteridaceae Ceratopteris Ceratopteris richardii
23107636 23107636 PRJNA1011833_S_NODE_17859_length_286_cov_6.798354_g17439_i0 PRJNA1011833 17859 286 6.798354 19.44329244 Magnoliopsida 3398 Plants Plants 135 8.999999999999999e-39   NR VVA24395.1 3755 g17439 i0 72.4 15.8286713286713 87 24 91.3 0 278 18 35 121 VVA24395.1 PREDICTED: small nuclear, partial [Prunus dulcis] diamond 4527 136 0.992647058823529 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Prunus Prunus dulcis
26615363 26615363 PRJNA1011833_S_NODE_54421_length_156_cov_1.699115_g54001_i0 PRJNA1011833 54421 156 1.699115 2.6506194 Eukaryota 2759 Plants Plants 67 3.19e-11   NR KAI5349152.1 3755 g54001 i0 58.8 14.7307692307692 51 21 98.1 0 4 156 1056 1106 KAI5349152.1 hypothetical protein L3X38_002039 [Prunus dulcis] diamond 2298 67.4 0.99406528189911 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Prunus Prunus dulcis
26781615 26781615 PRJNA1011833_S_NODE_19961_length_270_cov_2.537445_g19541_i0 PRJNA1011833 19961 270 2.537445 6.8511015 Cardamine amara subsp. amara 228776 Plants Plants 52 3.05e-5   NR KAL1211858.1 228776 g19541 i0 32.8 7.41111111111111 67 45 74.4 0 13 213 2130 2196 KAL1211858.1 hypothetical protein V5N11_023843 [Cardamine amara subsp. amara] diamond 2001 52 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Cardamine Cardamine amara
27058691 27058691 PRJNA1011833_S_NODE_31762_length_208_cov_2.909091_g31342_i0 PRJNA1011833 31762 208 2.909091 6.05090928 Eukaryota 2759 Plants Plants 93.6 4.17e-22   NR KAB8111270.1 4530 g31342 i0 60.9 23.7980769230769 69 27 99.5 0 1 207 91 159 KAB8111270.1 hypothetical protein EE612_048861, partial [Oryza sativa] diamond 4950 94.4 0.991525423728813 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
27595935 27595935 PRJNA1011833_S_NODE_5804_length_445_cov_9.823383_g5392_i0 PRJNA1011833 5804 445 9.823383 43.71405435 Eukaryota 2759 Plants Plants 121 1.72e-29   NR XP_022025792.1 4232 g5392 i0 49.2 13.6786516853933 120 60 80.2 1 1 357 311 430 XP_022025792.1 protein DJ-1 homolog B [Helianthus annuus] diamond 6087 122 0.991803278688525 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Helianthus Helianthus annuus
27824565 27824565 PRJNA1011833_S_NODE_11804_length_346_cov_3.607261_g11384_i0 PRJNA1011833 11804 346 3.607261 12.48112306 Ficus carica 3494 Plants Plants 44.3 0.00316   NR GMN50239.1 3494 g11384 i0 49.1 0.494219653179191 57 16 41.6 2 3 146 13 65 GMN50239.1 hypothetical protein TIFTF001_019411 [Ficus carica] diamond 171 44.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Moraceae Ficus Ficus carica
28361056 28361056 PRJNA1011833_S_NODE_2306_length_600_cov_14.635548_g1944_i0 PRJNA1011833 2306 600 14.635548 87.813288 Selaginella moellendorffii 88036 Plants Plants 46.2 0.0311   NR XP_002983666.1 88036 g1944 i0 45.7 0.46 46 25 23 0 598 461 31 76 XP_002983666.1 vesicle-associated protein 1-2 isoform X2 [Selaginella moellendorffii] diamond 276 46.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Lycopodiopsida Selaginellales Selaginellaceae Selaginella Selaginella moellendorffii
28574480 28574480 PRJNA1011833_S_NODE_20087_length_269_cov_2.548673_g19667_i0 PRJNA1011833 20087 269 2.548673 6.85593037 Eukaryota 2759 Plants Plants 42.7 0.0478   NR KAK1285928.1 4465 g19667 i0 29 3.1003717472119 69 45 77 1 235 29 237 301 KAK1285928.1 hypothetical protein QJS10_CPB20g01403 [Acorus calamus] diamond 834 42.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Acorales Acoraceae Acorus Acorus calamus
28606129 28606129 PRJNA1011833_S_NODE_3287_length_532_cov_9.186094_g2897_i0 PRJNA1011833 3287 532 9.186094 48.87002008 Eukaryota 2759 Plants Plants 122 5.34e-29   NR XP_008372269.3 3750 g2897 i0 39.8 5.90413533834586 166 89 90.2 3 517 38 338 498 XP_008372269.3 UDP-glycosyltransferase TURAN-like isoform X3 [Malus domestica] diamond 3141 123 0.991869918699187 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Malus Malus domestica
28637926 28637926 PRJNA1011833_S_NODE_26367_length_231_cov_1.787234_g25947_i0 PRJNA1011833 26367 231 1.787234 4.12851054 Magnoliopsida 3398 Plants Plants 50.4 1.5e-5   NR XP_021999348.1 4232 g25947 i0 40.6 10.4545454545455 64 38 83.1 0 213 22 34 97 XP_021999348.1 bet1-like SNARE 1-2 [Helianthus annuus] diamond 2415 50.8 0.992125984251969 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Helianthus Helianthus annuus
28645442 28645442 PRJNA1011833_S_NODE_10887_length_358_cov_4.536508_g10468_i0 PRJNA1011833 10887 358 4.536508 16.24069864 Asparagus officinalis 4686 Plants Plants 63.5 6.4e-9   NR XP_020261073.1 4686 g10468 i0 33 2.02793296089385 115 69 89.7 4 356 36 291 405 XP_020261073.1 ubiquitin-like modifier-activating enzyme 5 [Asparagus officinalis] diamond 726 63.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Asparagaceae Asparagus Asparagus officinalis
28929529 28929529 PRJNA1011833_S_NODE_18508_length_281_cov_2.596639_g18088_i0 PRJNA1011833 18508 281 2.596639 7.29655559 Cryptomeria japonica 3369 Plants Plants 43.1 0.0432   NR GLJ29223.1 3369 g18088 i0 31.5 0.950177935943061 89 59 94 2 273 10 659 746 GLJ29223.1 hypothetical protein SUGI_0576370 [Cryptomeria japonica] diamond 267 43.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
29087526 29087526 PRJNA1011833_S_NODE_28608_length_221_cov_1.617978_g28188_i0 PRJNA1011833 28608 221 1.617978 3.57573138 Spinacia oleracea 3562 Plants Plants 76.6 1.69e-15   NR XP_021848044.1 3562 g28188 i0 63.8 1.8868778280543 47 17 63.8 0 183 43 118 164 XP_021848044.1 uncharacterized protein LOC110787714 [Spinacia oleracea] diamond 417 76.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Chenopodiaceae Spinacia Spinacia oleracea
29426854 29426854 PRJNA1011833_S_NODE_2049_length_625_cov_12.609966_g1699_i0 PRJNA1011833 2049 625 12.609966 78.8122875 Eukaryota 2759 Plants Plants 256 1.76e-81   NR KAH7284858.1 49495 g1699 i0 65 88.0032 200 68 95.5 2 2 598 142 340 KAH7284858.1 hypothetical protein KP509_34G074100 [Ceratopteris richardii] diamond 55002 258 0.992248062015504 Eukaryota Embryophyta Viridiplantae Streptophyta Polypodiopsida Polypodiales Pteridaceae Ceratopteris Ceratopteris richardii
30066198 30066198 PRJNA1011833_S_NODE_30152_length_214_cov_4.304094_g29732_i0 PRJNA1011833 30152 214 4.304094 9.21076116 Ceratopteris richardii 49495 Plants Plants 47.8 2.14e-4   NR KAH7295277.1 49495 g29732 i0 39.6 4.19158878504673 53 30 71.5 1 1 153 109 161 KAH7295277.1 hypothetical protein KP509_27G040900 [Ceratopteris richardii] diamond 897 47.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Polypodiopsida Polypodiales Pteridaceae Ceratopteris Ceratopteris richardii
30469671 30469671 PRJNA1011833_S_NODE_5953_length_442_cov_10.378446_g5541_i0 PRJNA1011833 5953 442 10.378446 45.87273132 Fabaceae 3803 Plants Plants 48.5 6.88e-4   NR KHN46146.1 3848 g5541 i0 62.2 7.05203619909502 37 14 25.1 0 324 214 73 109 KHN46146.1 SelT-like protein [Glycine soja] diamond 3117 48.9 0.991820040899796 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Glycine Glycine soja
31267026 31267026 PRJNA1011833_S_NODE_19595_length_273_cov_1.491304_g19175_i0 PRJNA1011833 19595 273 1.491304 4.07125992 Vaccinium darrowii 229202 Plants Plants 47.4 0.00126   NR KAH7835713.1 229202 g19175 i0 48.6 3.14285714285714 35 18 38.5 0 140 244 192 226 KAH7835713.1 hypothetical protein Vadar_029117 [Vaccinium darrowii] diamond 858 47.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Ericaceae Vaccinium Vaccinium darrowii
31481092 31481092 PRJNA1011833_S_NODE_4196_length_493_cov_5.384444_g3794_i0 PRJNA1011833 4196 493 5.384444 26.54530892 Eukaryota 2759 Plants Plants 80.1 1.4e-14   NR XP_024376907.1 3218 g3794 i0 55.9 11.0993914807302 68 29 41.4 1 48 251 128 194 XP_024376907.1 THO complex subunit 4B-like [Physcomitrium patens] diamond 5472 80.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Funariales Funariaceae Physcomitrium Physcomitrium patens
31583474 31583474 PRJNA1011833_S_NODE_39096_length_186_cov_1.678322_g38676_i0 PRJNA1011833 39096 186 1.678322 3.12167892 Miscanthus lutarioriparius 422564 Plants Plants 49.7 6.46e-5   NR CAD6226389.1 422564 g38676 i0 43.6 2.66129032258065 55 30 88.7 1 168 4 1268 1321 CAD6226389.1 unnamed protein product [Miscanthus lutarioriparius] diamond 495 49.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Miscanthus Miscanthus lutarioriparius
31614896 31614896 PRJNA1011833_S_NODE_33736_length_202_cov_0.905660_g33316_i0 PRJNA1011833 33736 202 0.90566 1.8294332 Malania oleifera 397392 Plants Plants 47 5.19e-4   NR XP_057973784.1 397392 g33316 i0 68.8 0.475247524752475 32 9 47.5 1 97 192 156 186 XP_057973784.1 glycine-rich protein 2-like [Malania oleifera] diamond 96 47 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Santalales Ximeniaceae Malania Malania oleifera
32050153 32050153 PRJNA1011833_S_NODE_14858_length_313_cov_2.662963_g14438_i0 PRJNA1011833 14858 313 2.662963 8.33507419 Linum 4005 Plants Plants 46.6 0.00354   NR CAI0436930.1 586396 g14438 i0 36.4 1.47603833865815 77 41 73.8 1 232 2 43 111 CAI0436930.1 unnamed protein product [Linum tenue] diamond 462 46.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Linaceae Linum Linum tenue
32208425 32208425 PRJNA1011833_S_NODE_30738_length_212_cov_1.988166_g30318_i0 PRJNA1011833 30738 212 1.988166 4.21491192 Eukaryota 2759 Plants Plants 55.8 5.98e-7   NR KAJ3681232.1 13579 g30318 i0 39.4 5.94339622641509 71 41 97.6 2 2 208 992 1062 KAJ3681232.1 hypothetical protein LUZ60_015721 [Juncus effusus] diamond 1260 55.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Juncaceae Juncus Juncus effusus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;