RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1010780" and tax_phylum = "Uroviricota"

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tax_superkingdom 1

tax_phylum 1

  • Uroviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1010780 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26844995 26844995 PRJNA1010780_S_NODE_44981_length_189_cov_1.545455_g43692_i0 PRJNA1010780 44981 189 1.545455 2.92090995 Bacillus phage G 2884420 Viruses Viruses 43.9 0.00707   NR YP_009015667.1 2884420 g43692 i0 48.7 0.619047619047619 39 20 61.9 0 60 176 87 125 YP_009015667.1 gp364 [Bacillus phage G] diamond 117 43.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Donellivirus Donellivirus gee
29206228 29206228 PRJNA1010780_S_NODE_25429_length_312_cov_1.765343_g24140_i0 PRJNA1010780 25429 312 1.765343 5.50787016 Viruses 10239 Viruses Viruses 93.6 8.07e-21   NR WQJ54341.1 3109224 g24140 i0 48.5 1.98076923076923 103 52 99 1 312 4 21 122 WQJ54341.1 MAG: hypothetical protein [phage Lak_Megaphage_RVC_AP1_GC26] diamond 618 93.6 1 Viruses Caudoviricetes code 15 clade Heunggongvirae Uroviricota Caudoviricetes       phage Lak_Megaphage_RVC_AP1_GC26
32089313 32089313 PRJNA1010780_S_NODE_23258_length_342_cov_1.912052_g21969_i0 PRJNA1010780 23258 342 1.912052 6.53921784 Bacillus phage vB_BanS_Nate 2894788 Viruses Viruses 57.4 3.25e-7   NR YP_010680305.1 2894788 g21969 i0 31.6 0.833333333333333 95 63 81.6 2 336 58 86 180 YP_010680305.1 nucleotidyltransferase [Bacillus phage vB_BanS_Nate] diamond 285 57.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Natevirus Natevirus nate

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;