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contig_metadata

27 rows where analysis = "diamond", bioproject = "PRJNA1010780" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 27 ✖

tax_clade 1

bioproject 1

  • PRJNA1010780 · 27 ✖

analysis 1

  • diamond · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15457614 15457614 PRJNA1010780_S_NODE_10013_length_769_cov_16.299728_g9066_i0 PRJNA1010780 10013 769 16.299728000000002 125.34490832 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 275 1.77e-90   NR XP_001322019.1 412133 g9066 i0 75 1.35370611183355 172 42 67.1 1 89 604 2 172 XP_001322019.1 peptidyl-prolyl cis-trans isomerase protein [Trichomonas vaginalis G3] diamond 1041 275 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
26686355 26686355 PRJNA1010780_S_NODE_5221_length_1185_cov_6.286087_g4706_i0 PRJNA1010780 5221 1185 6.286087 74.49013095 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 68.2 2.05e-8   NR XP_068369291.1 1144522 g4706 i0 33.3 0.258227848101266 102 57 25.8 1 460 155 7 97 XP_068369291.1 uncharacterized protein TRFO_42039 [Tritrichomonas foetus] diamond 306 68.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27097744 27097744 PRJNA1010780_S_NODE_25402_length_312_cov_2.382671_g24113_i0 PRJNA1010780 25402 312 2.382671 7.43393352 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 99 3.45e-22   NR XP_067778432.1 135588 g24113 i0 50 1.01923076923077 106 48 99 2 311 3 215 318 XP_067778432.1 cell division cycle protein [Histomonas meleagridis] diamond 318 99 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
27382396 27382396 PRJNA1010780_S_NODE_37063_length_220_cov_1.843243_g35774_i0 PRJNA1010780 37063 220 1.843243 4.0551346 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 66.2 3.46e-11   NR XP_067774751.1 135588 g35774 i0 52.5 2.44090909090909 59 28 80.5 0 44 220 21 79 XP_067774751.1 Ras family protein [Histomonas meleagridis] diamond 537 66.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
27571774 27571774 PRJNA1010780_S_NODE_59264_length_156_cov_2.066116_g57975_i0 PRJNA1010780 59264 156 2.066116 3.22314096 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 77.4 3.84e-15   NR XP_068361364.1 1144522 g57975 i0 70 1.94230769230769 50 15 96.2 0 152 3 13 62 XP_068361364.1 DnaJ subfamily B member 5 [Tritrichomonas foetus] diamond 303 77.4 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27571780 27571780 PRJNA1010780_S_NODE_61284_length_153_cov_1.559322_g59995_i0 PRJNA1010780 61284 153 1.559322 2.38576266 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 61.6 8.38e-10   NR XP_068347696.1 1144522 g59995 i0 58.7 2.80392156862745 46 19 90.2 0 6 143 62 107 XP_068347696.1 Ras-related protein RABD1 [Tritrichomonas foetus] diamond 429 61.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27785427 27785427 PRJNA1010780_S_NODE_48184_length_180_cov_1.262069_g46895_i0 PRJNA1010780 48184 180 1.262069 2.2717242 root 1 Root_unresolved Root_unresolved 42 0.0219   NR XP_068347906.1 1144522 g46895 i0 30.9 7.48333333333333 55 31 91.7 1 178 14 65 112 XP_068347906.1 small GTP-binding protein [Tritrichomonas foetus] diamond 1347 42 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
28013946 28013946 PRJNA1010780_S_NODE_23325_length_341_cov_1.892157_g22036_i0 PRJNA1010780 23325 341 1.892157 6.45225537 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 67.4 1.75e-10   NR XP_001323234.1 412133 g22036 i0 34.3 1.90029325513196 108 69 94.1 2 20 340 41 147 XP_001323234.1 MAP kinase kinase kinase protein [Trichomonas vaginalis G3] diamond 648 67.4 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
28037897 28037897 PRJNA1010780_S_NODE_49045_length_177_cov_2.845070_g47756_i0 PRJNA1010780 49045 177 2.84507 5.0357739 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 42.7 0.0125   NR ABA39444.1 5722 g47756 i0 35.1 3.77966101694915 57 36 94.9 1 10 177 83 139 ABA39444.1 RasC [Trichomonas vaginalis] diamond 669 43.1 0.990719257540603 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
28076820 28076820 PRJNA1010780_S_NODE_32425_length_247_cov_1.094340_g31136_i0 PRJNA1010780 32425 247 1.09434 2.7030198 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 42.7 0.0392   NR XP_001318022.1 412133 g31136 i0 28.8 0.88663967611336 73 40 88.7 1 226 8 168 228 XP_001318022.1 phosphorelay sensor kinase protein [Trichomonas vaginalis G3] diamond 219 42.7 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
28226980 28226980 PRJNA1010780_S_NODE_9826_length_780_cov_7.722148_g8891_i0 PRJNA1010780 9826 780 7.722148 60.2327544 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 105 1.2699999999999999e-23   NR XP_001316449.1 412133 g8891 i0 33.5 3.89615384615385 170 111 65 2 618 112 13 181 XP_001316449.1 regulation of endocytosis [Trichomonas vaginalis G3] diamond 3039 105 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
29119061 29119061 PRJNA1010780_S_NODE_10069_length_766_cov_5.388509_g9118_i0 PRJNA1010780 10069 766 5.388509 41.27597894 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 58.5 2.06e-6   NR XP_067771703.1 135588 g9118 i0 29.7 3.42297650130548 172 95 62.3 7 198 674 4 162 XP_067771703.1 ras-related protein Rab-13 [Histomonas meleagridis] diamond 2622 58.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
29371543 29371543 PRJNA1010780_S_NODE_38069_length_215_cov_2.394444_g36780_i0 PRJNA1010780 38069 215 2.394444 5.1480546 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 50.8 3.47e-5   NR XP_068367223.1 1144522 g36780 i0 42.4 0.92093023255814 66 32 83.7 3 190 11 39 104 XP_068367223.1 CAMK family protein kinase [Tritrichomonas foetus] diamond 198 50.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30129139 30129139 PRJNA1010780_S_NODE_63132_length_150_cov_2.652174_g61843_i0 PRJNA1010780 63132 150 2.652174 3.978261 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 43.1 0.00739   NR XP_068360986.1 1144522 g61843 i0 44.1 0.68 34 19 68 0 1 102 208 241 XP_068360986.1 uncharacterized protein TRFO_23795 [Tritrichomonas foetus] diamond 102 43.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30287823 30287823 PRJNA1010780_S_NODE_54152_length_166_cov_1.114504_g52863_i0 PRJNA1010780 54152 166 1.114504 1.85007664 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 42.4 0.0185   NR XP_068369811.1 1144522 g52863 i0 37 1.55421686746988 46 23 72.3 1 23 142 578 623 XP_068369811.1 Laminin A family protein [Tritrichomonas foetus] diamond 258 42.4 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30785349 30785349 PRJNA1010780_S_NODE_44254_length_191_cov_2.102564_g42965_i0 PRJNA1010780 44254 191 2.102564 4.01589724 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 68.9 1.04e-11   NR XP_067770501.1 135588 g42965 i0 61 1.90052356020942 59 23 92.7 0 180 4 165 223 XP_067770501.1 eukaryotic peptide chain release factor subunit 1-2 [Histomonas meleagridis] diamond 363 69.3 0.994227994227994 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
31046058 31046058 PRJNA1010780_S_NODE_6795_length_1019_cov_13.934959_g6105_i0 PRJNA1010780 6795 1019 13.934959 141.99723221 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 63.5 4.71e-7   NR XP_001301216.1 412133 g6105 i0 40 0.250245338567223 85 43 25 2 316 62 217 293 XP_001301216.1 U-box domain family [Trichomonas vaginalis G3] diamond 255 63.5 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
31171741 31171741 PRJNA1010780_S_NODE_16955_length_479_cov_3.565315_g15694_i0 PRJNA1010780 16955 479 3.565315 17.07785885 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 82.8 3.27e-16   NR XP_001309717.1 412133 g15694 i0 39.5 0.713987473903967 114 61 71.4 1 17 358 62 167 XP_001309717.1 regulation of endocytosis [Trichomonas vaginalis G3] diamond 342 82.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
31171806 31171806 PRJNA1010780_S_NODE_42815_length_196_cov_2.124224_g41526_i0 PRJNA1010780 42815 196 2.124224 4.16347904 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 43.9 0.00195   NR XP_001314726.1 412133 g41526 i0 53.3 0.459183673469388 30 14 45.9 0 105 194 51 80 XP_001314726.1 positive regulation of ATP-dependent microtubule motor activity, plus-end-directed [Trichomonas vaginalis G3] diamond 90 43.9 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
31171824 31171824 PRJNA1010780_S_NODE_52975_length_168_cov_1.879699_g51686_i0 PRJNA1010780 52975 168 1.879699 3.15789432 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 54.3 7.96e-7   NR XP_068360986.1 1144522 g51686 i0 39.2 2.71428571428571 51 31 91.1 0 3 155 191 241 XP_068360986.1 uncharacterized protein TRFO_23795 [Tritrichomonas foetus] diamond 456 54.3 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31424967 31424967 PRJNA1010780_S_NODE_19696_length_409_cov_2.553476_g18408_i0 PRJNA1010780 19696 409 2.553476 10.44371684 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 55.5 7.48e-6   NR XP_068349284.1 1144522 g18408 i0 34.3 0.748166259168704 102 59 74.8 3 104 409 295 388 XP_068349284.1 uncharacterized protein TRFO_37682 [Tritrichomonas foetus] diamond 306 55.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31512571 31512571 PRJNA1010780_S_NODE_27076_length_293_cov_1.825581_g25787_i0 PRJNA1010780 27076 293 1.825581 5.34895233 root 1 Root_unresolved Root_unresolved 46.2 0.00379   NR XP_068351947.1 1144522 g25787 i0 50 4.4641638225256 44 21 45.1 1 2 133 24 66 XP_068351947.1 WD repeat-containing protein 5 [Tritrichomonas foetus] diamond 1308 46.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31583321 31583321 PRJNA1010780_S_NODE_10696_length_731_cov_2.623563_g9703_i0 PRJNA1010780 10696 731 2.623563 19.17824553 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 48.5 0.0112   NR XP_067776431.1 135588 g9703 i0 38.5 1.33789329685363 65 38 25.9 1 345 157 180 244 XP_067776431.1 SHIPPO repeat domain-containing protein [Histomonas meleagridis] diamond 978 48.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
31702150 31702150 PRJNA1010780_S_NODE_6797_length_1019_cov_12.107724_g6107_i0 PRJNA1010780 6797 1019 12.107724 123.37770756 Tritrichomonadida 740972 Parabasalia other_Eukaryota 53.5 2.34e-4   NR XP_068365242.1 1144522 g6107 i0 26.4 2.23454367026497 220 130 63 9 771 130 7 200 XP_068365242.1 Ras-related protein ORAB-1 [Tritrichomonas foetus] diamond 2277 53.9 0.992578849721707 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31899545 31899545 PRJNA1010780_S_NODE_40837_length_203_cov_3.738095_g39548_i0 PRJNA1010780 40837 203 3.738095 7.58833285 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 44.7 0.00458   NR XP_068367805.1 1144522 g39548 i0 37.7 0.783251231527094 53 33 78.3 0 40 198 6 58 XP_068367805.1 uncharacterized protein TRFO_14836 [Tritrichomonas foetus] diamond 159 44.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
32752856 32752856 PRJNA1010780_S_NODE_12060_length_660_cov_4.289600_g10984_i0 PRJNA1010780 12060 660 4.2896 28.31136 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 47.4 0.0196   NR XP_068349412.1 1144522 g10984 i0 54.1 0.354545454545455 37 17 16.8 0 111 1 63 99 XP_068349412.1 uncharacterized protein TRFO_37578 [Tritrichomonas foetus] diamond 234 47.4 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
32871313 32871313 PRJNA1010780_S_NODE_59120_length_156_cov_3.206612_g57831_i0 PRJNA1010780 59120 156 3.206612 5.00231472 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 68.6 8.77e-12   NR XP_068351939.1 1144522 g57831 i0 52.9 3.92307692307692 51 24 98.1 0 154 2 3872 3922 XP_068351939.1 Dynein heavy chain family protein [Tritrichomonas foetus] diamond 612 68.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;