RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1010662" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1010662 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28392569 28392569 PRJNA1010662_P_NODE_17046_length_160_cov_2.666667_g16987_i0 PRJNA1010662 17046 160 2.666667 4.2666672 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 82.8 1.6e-19   NR MES1911722.1 1215613 g16987 i0 72.5 0.95625 51 14 95.6 0 6 158 1 51 MES1911722.1 hypothetical protein [Cercozoa sp. M6MM] diamond 153 82.8 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
31101126 31101126 PRJNA1010662_P_NODE_13195_length_168_cov_0.865546_g13136_i0 PRJNA1010662 13195 168 0.865546 1.45411728 Durusdinium 2486699 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.0134   NR MES1915849.1 1215613 g13136 i0 63 2.41071428571429 27 10 48.2 0 2 82 253 279 MES1915849.1 hypothetical protein [Cercozoa sp. M6MM] diamond 405 42.7 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
32532462 32532462 PRJNA1010662_P_NODE_15899_length_163_cov_0.912281_g15840_i0 PRJNA1010662 15899 163 0.912281 1.48701803 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 87.4 2.29e-18   NR MES1911124.1 1215613 g15840 i0 77.4 0.975460122699387 53 12 97.5 0 160 2 455 507 MES1911124.1 hypothetical protein [Cercozoa sp. M6MM] diamond 159 87.4 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;