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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1010662" and tax_kingdom = "Thermotogati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 7 ✖

bioproject 1

  • PRJNA1010662 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20556103 20556103 PRJNA1010662_P_NODE_6677_length_215_cov_1.132530_g6618_i0 PRJNA1010662 6677 215 1.13253 2.4349395 Bacteria 2 Bacteria Bacteria 125 1.99e-31   NR WP_337870273.1 1955249 g6618 i0 83.1 17.693023255814 71 12 99.1 0 214 2 689 759 WP_337870273.1 aminomethyl-transferring glycine dehydrogenase [Meiothermus sp.] diamond 3804 125 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus sp.
29837389 29837389 PRJNA1010662_P_NODE_2011_length_358_cov_1.326861_g1952_i0 PRJNA1010662 2011 358 1.326861 4.75016238 Bacteria 2 Bacteria Bacteria 166 1.13e-45   NR WP_345455539.1 1656885 g1952 i0 66.1 20.7653631284916 118 40 98.9 0 5 358 209 326 WP_345455539.1 NAD-dependent malic enzyme [Deinococcus aluminii] diamond 7434 166 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus aluminii
30824373 30824373 PRJNA1010662_P_NODE_11394_length_175_cov_1.579365_g11335_i0 PRJNA1010662 11394 175 1.579365 2.76388875 Thermotoga sp. Ku-13t 1755813 Bacteria Bacteria 69.7 6.73e-13   NR WP_165275142.1 1755813 g11335 i0 64.7 0.874285714285714 51 18 87.4 0 156 4 119 169 WP_165275142.1 macro domain-containing protein [Thermotoga sp. Ku-13t] diamond 153 69.7 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Thermotogaceae Thermotoga Thermotoga sp. Ku-13t
31164159 31164159 PRJNA1010662_P_NODE_555_length_667_cov_2.281553_g504_i0 PRJNA1010662 555 667 2.281553 15.21795851 root 1 Root_unresolved Root_unresolved 103 2.5e-24   NR WP_128080917.1 2335 g504 i0 45.6 5.84257871064468 125 60 55.3 4 539 171 6 124 WP_128080917.1 MULTISPECIES: glycine cleavage system protein GcvH [Thermotoga] diamond 3897 104 0.990384615384615 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Thermotogaceae Thermotoga  
31266864 31266864 PRJNA1010662_P_NODE_13335_length_167_cov_1.576271_g13276_i0 PRJNA1010662 13335 167 1.576271 2.63237257 Deinococcus sp. 47478 Bacteria Bacteria 71.2 1.14e-12   NR MBI3962125.1 47478 g13276 i0 55.6 2.94610778443114 54 24 97 0 166 5 262 315 MBI3962125.1 LON peptidase substrate-binding domain-containing protein [Deinococcus sp.] diamond 492 71.2 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp.
32500825 32500825 PRJNA1010662_P_NODE_16299_length_163_cov_0.877193_g16240_i0 PRJNA1010662 16299 163 0.877193 1.42982459 Thermotoga sp. KOL6 126741 Bacteria Bacteria 59.3 1.8e-8   NR WP_101510730.1 126741 g16240 i0 51.9 2.98159509202454 54 23 99.4 1 1 162 467 517 WP_101510730.1 AAA family ATPase [Thermotoga sp. KOL6] diamond 486 59.3 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Thermotogaceae Thermotoga Thermotoga sp. KOL6
32784174 32784174 PRJNA1010662_P_NODE_4420_length_252_cov_1.522167_g4361_i0 PRJNA1010662 4420 252 1.522167 3.83586084 Deinococcus apachensis 309886 Bacteria Bacteria 70.9 7.27e-13   NR WP_019586246.1 309886 g4361 i0 39.1 2.10714285714286 87 49 98.8 1 250 2 57 143 WP_019586246.1 SMI1/KNR4 family protein [Deinococcus apachensis] diamond 531 70.9 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus apachensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;