RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1010662" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA1010662 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27508670 27508670 PRJNA1010662_P_NODE_11503_length_174_cov_1.664000_g11444_i0 PRJNA1010662 11503 174 1.664 2.89536 Barrevirus sp. 2487763 Viruses Viruses 70.9 1.25e-12   NR AYV77123.1 2487763 g11444 i0 57.1 0.96551724137931 56 24 96.6 0 2 169 250 305 AYV77123.1 MAG: GDP-mannose 4,6 dehydratase [Barrevirus sp.] diamond 168 70.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Barrevirus sp.
31520015 31520015 PRJNA1010662_P_NODE_14196_length_166_cov_0.880342_g14137_i0 PRJNA1010662 14196 166 0.880342 1.46136772 Mimivirus LCMiAC 2506609 Viruses Viruses 43.5 0.00706   NR QBK89022.1 2506609 g14137 i0 68 2.69277108433735 25 8 45.2 0 8 82 20 44 QBK89022.1 MAG: MORN repeat protein [Mimivirus LCMiAC02] diamond 447 43.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Mimivirus LCMiAC02
32152582 32152582 PRJNA1010662_P_NODE_13078_length_168_cov_0.873950_g13019_i0 PRJNA1010662 13078 168 0.87395 1.468236 Homavirus sp. 2487769 Viruses Viruses 91.7 8.09e-20   NR AYV82270.1 2487769 g13019 i0 67.3 0.982142857142857 55 18 98.2 0 165 1 439 493 AYV82270.1 MAG: hypothetical protein Homavirus23_1, partial [Homavirus sp.] diamond 165 91.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Homavirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;