RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1010662" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 7 ✖

bioproject 1

  • PRJNA1010662 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3981366 3981366 PRJNA1010662_P_NODE_6364_length_218_cov_2.266272_g6305_i0 PRJNA1010662 6364 218 2.266272 4.94047296 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 83.6 7.89e-17   NR XP_013762925.1 461836 g6305 i0 52.9 1.84403669724771 68 32 93.6 0 1 204 259 326 XP_013762925.1 cruzipain [Thecamonas trahens ATCC 50062] diamond 402 83.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
26844900 26844900 PRJNA1010662_P_NODE_7341_length_207_cov_1.930380_g7282_i0 PRJNA1010662 7341 207 1.93038 3.9958866 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 48.5 9.8e-5   NR XP_013753243.1 461836 g7282 i0 41.4 1.01449275362319 70 40 100 1 207 1 7 76 XP_013753243.1 uncharacterized protein AMSG_10809 [Thecamonas trahens ATCC 50062] diamond 210 48.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
26971093 26971093 PRJNA1010662_P_NODE_2182_length_344_cov_1.400000_g2123_i0 PRJNA1010662 2182 344 1.4 4.816 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 76.3 2.09e-13   NR XP_013763036.1 461836 g2123 i0 44.6 0.976744186046512 112 50 90.7 4 316 5 380 487 XP_013763036.1 tripeptidyl peptidase [Thecamonas trahens ATCC 50062] diamond 336 76.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28195461 28195461 PRJNA1010662_P_NODE_14806_length_165_cov_0.896552_g14747_i0 PRJNA1010662 14806 165 0.896552 1.4793108 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 51.6 9.43e-6   NR XP_013761031.1 461836 g14747 i0 50.9 3.85454545454545 53 26 96.4 0 163 5 251 303 XP_013761031.1 Cullin-3 [Thecamonas trahens ATCC 50062] diamond 636 52 0.992307692307692 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28455892 28455892 PRJNA1010662_P_NODE_2906_length_303_cov_1.228346_g2847_i0 PRJNA1010662 2906 303 1.228346 3.72188838 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 96.7 3.75e-22   NR XP_013762487.1 461836 g2847 i0 55 0.792079207920792 80 36 79.2 0 303 64 152 231 XP_013762487.1 countin-1 [Thecamonas trahens ATCC 50062] diamond 240 96.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29529348 29529348 PRJNA1010662_P_NODE_3590_length_274_cov_2.937778_g3531_i0 PRJNA1010662 3590 274 2.937778 8.04951172 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 86.3 2.66e-17   NR XP_013760714.1 461836 g3531 i0 50.6 0.974452554744526 89 42 97.4 2 271 5 143 229 XP_013760714.1 surfactant protein B containing protein [Thecamonas trahens ATCC 50062] diamond 267 86.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31677903 31677903 PRJNA1010662_P_NODE_14577_length_165_cov_1.327586_g14518_i0 PRJNA1010662 14577 165 1.327586 2.1905169 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 62.8 1.08e-9   NR XP_013760629.1 461836 g14518 i0 68.3 0.745454545454545 41 13 74.5 0 5 127 857 897 XP_013760629.1 uncharacterized protein AMSG_02788 [Thecamonas trahens ATCC 50062] diamond 123 62.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;