RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1009807" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1009807 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27887285 27887285 PRJNA1009807_S_NODE_2725_length_192_cov_2.320261_g2697_i0 PRJNA1009807 2725 192 2.320261 4.45490112 Anthophora plagiata 597819 Arthropoda Arthropoda 43.9 0.00747   NR CAK9813121.1 597819 g2697 i0 48.6 2.734375 35 18 54.7 0 40 144 222 256 CAK9813121.1 Transposable element Tc1 transposase [Anthophora plagiata] diamond 525 44.3 0.99097065462754 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hymenoptera Apidae Anthophora Anthophora plagiata
28992807 28992807 PRJNA1009807_S_NODE_3148_length_182_cov_1.202797_g3120_i0 PRJNA1009807 3148 182 1.202797 2.18909054 Petrolisthes cinctipes 88211 Arthropoda Arthropoda 99.8 1.4000000000000002e-22   NR KAK3884497.1 88211 g3120 i0 70 1.96153846153846 60 18 98.9 0 2 181 139 198 KAK3884497.1 hypothetical protein Pcinc_011235 [Petrolisthes cinctipes] diamond 357 99.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Decapoda Porcellanidae Petrolisthes Petrolisthes cinctipes

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;