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contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJNA1008624" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 16 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1008624 · 16 ✖

analysis 1

  • diamond · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7806670 7806670 PRJNA1008624_P_NODE_1887_length_628_cov_5.694301_g1718_i0 PRJNA1008624 1887 628 5.694301 35.76021028 Granulicella arctica 940613 Bacteria Bacteria 92 2.45e-18   NR WP_179492168.1 940613 g1718 i0 67.6 1.32802547770701 71 22 33.4 1 628 419 71 141 WP_179492168.1 patatin-like phospholipase family protein [Granulicella arctica] diamond 834 92 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Granulicella Granulicella arctica
27153003 27153003 PRJNA1008624_P_NODE_27242_length_169_cov_0.866667_g27054_i0 PRJNA1008624 27242 169 0.866667 1.46466723 Pseudomonadati 3379134 Bacteria Bacteria 50.4 1.36e-5   NR MEW6126741.1 1978231 g27054 i0 40.4 3.03550295857988 57 32 97.6 1 1 165 115 171 MEW6126741.1 hypothetical protein [Acidobacteriota bacterium] diamond 513 50.4 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27255701 27255701 PRJNA1008624_P_NODE_26203_length_171_cov_1.680328_g26015_i0 PRJNA1008624 26203 171 1.680328 2.87336088 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 43.1 0.00594   NR HEX7531461.1 2283092 g26015 i0 62.5 0.56140350877193 32 11 56.1 1 168 73 70 100 HEX7531461.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 96 43.1 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27382290 27382290 PRJNA1008624_P_NODE_7123_length_314_cov_2.384906_g6935_i0 PRJNA1008624 7123 314 2.384906 7.48860484 Acidobacteriota bacterium 1978231 Bacteria Bacteria 92 1.04e-19   NR RMH32455.1 1978231 g6935 i0 57.5 0.764331210191083 80 34 76.4 0 312 73 229 308 RMH32455.1 MAG: NAD-dependent epimerase/dehydratase family protein [Acidobacteriota bacterium] diamond 240 92 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27634912 27634912 PRJNA1008624_P_NODE_35604_length_163_cov_0.912281_g35416_i0 PRJNA1008624 35604 163 0.912281 1.48701803 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 60.1 9.24e-9   NR HEY8560515.1 2283092 g35416 i0 61.2 0.901840490797546 49 19 90.2 0 6 152 608 656 HEY8560515.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 147 60.1 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27690838 27690838 PRJNA1008624_P_NODE_30944_length_166_cov_0.888889_g30756_i0 PRJNA1008624 30944 166 0.888889 1.47555574 root 1 Root_unresolved Root_unresolved 106 1.0600000000000002e-27   NR OYV95157.1 1970485 g30756 i0 86.8 1.91566265060241 53 7 95.8 0 5 163 5 57 OYV95157.1 MAG: hypothetical protein B7Z68_07320, partial [Acidobacteria bacterium 21-70-11] diamond 318 106 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteria bacterium 21-70-11
28108226 28108226 PRJNA1008624_P_NODE_24645_length_176_cov_1.590551_g24457_i0 PRJNA1008624 24645 176 1.590551 2.79936976 Edaphobacter sp. 1934404 Bacteria Bacteria 41.6 0.0384   NR HTF63506.1 1934404 g24457 i0 40 0.852272727272727 50 30 85.2 0 176 27 213 262 HTF63506.1 transglutaminase family protein [Edaphobacter sp.] diamond 150 41.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter sp.
28202882 28202882 PRJNA1008624_P_NODE_35406_length_163_cov_0.912281_g35218_i0 PRJNA1008624 35406 163 0.912281 1.48701803 Bryobacterales bacterium 2026791 Bacteria Bacteria 40.4 0.0135   NR MCZ2079903.1 2026791 g35218 i0 48.5 0.607361963190184 33 17 60.7 0 101 3 10 42 MCZ2079903.1 hypothetical protein [Bryobacterales bacterium] diamond 99 40.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
28290220 28290220 PRJNA1008624_P_NODE_18466_length_199_cov_0.886667_g18278_i0 PRJNA1008624 18466 199 0.886667 1.76446733 PVC group 1783257 Bacteria Bacteria 83.2 3.99e-18   NR HZS47225.1 2052146 g18278 i0 75.9 4.31155778894472 58 14 87.4 0 5 178 19 76 HZS47225.1 hypothetical protein [Blastocatellia bacterium] diamond 858 83.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
28929346 28929346 PRJNA1008624_P_NODE_35528_length_163_cov_0.912281_g35340_i0 PRJNA1008624 35528 163 0.912281 1.48701803 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 65.9 5.98e-11   NR HEV7242359.1 2651171 g35340 i0 57.4 0.993865030674847 54 22 97.5 1 3 161 172 225 HEV7242359.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 162 65.9 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
29079811 29079811 PRJNA1008624_P_NODE_26228_length_171_cov_1.639344_g26040_i0 PRJNA1008624 26228 171 1.639344 2.80327824 Bryobacter 911113 Bacteria Bacteria 67.8 5.63e-12   NR MFN8811474.1 1978231 g26040 i0 71.2 4.70175438596491 52 15 91.2 0 156 1 88 139 MFN8811474.1 hypothetical protein [Acidobacteriota bacterium] diamond 804 67.8 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29213727 29213727 PRJNA1008624_P_NODE_34669_length_163_cov_1.570175_g34481_i0 PRJNA1008624 34669 163 1.570175 2.55938525 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 47.8 2.08e-4   NR HWT01205.1 2283092 g34481 i0 45.1 0.938650306748466 51 20 93.9 1 161 9 301 343 HWT01205.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 153 47.8 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30911863 30911863 PRJNA1008624_P_NODE_32534_length_165_cov_0.896552_g32346_i0 PRJNA1008624 32534 165 0.896552 1.4793108 Pseudomonadati 3379134 Bacteria Bacteria 86.3 3.23e-18   NR MBN2430518.1 1978231 g32346 i0 75 12.6 52 13 94.5 0 159 4 33 84 MBN2430518.1 hypothetical protein [Acidobacteriota bacterium] diamond 2079 86.7 0.995386389850058 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31519988 31519988 PRJNA1008624_P_NODE_30136_length_167_cov_0.881356_g29948_i0 PRJNA1008624 30136 167 0.881356 1.47186452 Acidobacteriota bacterium 1978231 Bacteria Bacteria 42.4 0.0182   NR MDE3196572.1 1978231 g29948 i0 44.4 1.52694610778443 45 24 79 1 154 23 81 125 MDE3196572.1 DUF362 domain-containing protein [Acidobacteriota bacterium] diamond 255 42.4 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31709640 31709640 PRJNA1008624_P_NODE_32557_length_165_cov_0.896552_g32369_i0 PRJNA1008624 32557 165 0.896552 1.4793108 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 40.8 0.0115   NR MEZ5421830.1 2283092 g32369 i0 62.1 1.05454545454545 29 11 52.7 0 5 91 40 68 MEZ5421830.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 174 40.8 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32026012 32026012 PRJNA1008624_P_NODE_27738_length_169_cov_0.866667_g27550_i0 PRJNA1008624 27738 169 0.866667 1.46466723 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 78.2 4.21e-16   NR HEX3101898.1 2283092 g27550 i0 72.7 0.976331360946746 55 15 97.6 0 167 3 86 140 HEX3101898.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 165 78.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;