RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1008624" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 3 ✖

bioproject 1

  • PRJNA1008624 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11632531 11632531 PRJNA1008624_P_NODE_13390_length_229_cov_1.894444_g13202_i0 PRJNA1008624 13390 229 1.894444 4.33827676 Crogonang virus 31 3063426 Viruses Viruses 68.6 2.5e-11   NR WPR18629.1 3063426 g13202 i0 49.2 0.851528384279476 65 31 85.2 1 196 2 117 179 WPR18629.1 MAG: hypothetical protein [Crogonang virus 31] diamond 195 68.6 1 Viruses   Shotokuvirae Cressdnaviricota         Crogonang virus 31
30287657 30287657 PRJNA1008624_P_NODE_23892_length_179_cov_0.969231_g23704_i0 PRJNA1008624 23892 179 0.969231 1.73492349 Psittaciform aveparvovirus 3042447 Viruses Viruses 48.1 1.94e-4   NR WGL41068.1 3042447 g23704 i0 49 0.854748603351955 51 18 80.4 2 165 22 15 60 WGL41068.1 replication protein [Psittaciform aveparvovirus] diamond 153 48.1 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Aveparvovirus Psittaciform aveparvovirus
32050103 32050103 PRJNA1008624_P_NODE_3598_length_453_cov_1.658416_g3412_i0 PRJNA1008624 3598 453 1.658416 7.51262448 Viruses 10239 Viruses Viruses 116 1.21e-28   NR WAE42659.1 2748378 g3412 i0 63.4 2.19205298013245 82 30 54.3 0 248 3 21 102 WAE42659.1 MAG: replication associated protein [Cressdnaviricota sp.] diamond 993 117 0.991452991452991 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;