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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA1008624" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA1008624 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12480138 12480138 PRJNA1008624_P_NODE_1370_length_739_cov_3.578261_g1214_i0 PRJNA1008624 1370 739 3.578261 26.44334879 Thermococcus 2263 Archaea Archaea 441 8.4e-140   NR WP_167728776.1 163002 g1214 i0 98.6 4.48579161028417 221 3 89.7 0 77 739 1 221 WP_167728776.1 DNA polymerase domain-containing protein [Thermococcus sp. 9N3] diamond 3315 441 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. 9N3
18006477 18006477 PRJNA1008624_P_NODE_8395_length_288_cov_5.464435_g8207_i0 PRJNA1008624 8395 288 5.464435 15.7375728 Thermococcus 2263 Archaea Archaea 188 4.21e-53   NR WP_167728776.1 163002 g8207 i0 100 8.72916666666667 93 0 96.9 0 8 286 224 316 WP_167728776.1 DNA polymerase domain-containing protein [Thermococcus sp. 9N3] diamond 2514 188 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. 9N3
27002644 27002644 PRJNA1008624_P_NODE_2382_length_560_cov_3.540117_g2204_i0 PRJNA1008624 2382 560 3.540117 19.8246552 Methanomassiliicoccales archaeon 1906667 Archaea Archaea 61.6 9.3e-9   NR MFA5313869.1 1906667 g2204 i0 55.1 0.2625 49 22 26.3 0 152 6 1 49 MFA5313869.1 hypothetical protein [Methanomassiliicoccales archaeon] diamond 147 61.6 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon
27128869 27128869 PRJNA1008624_P_NODE_13202_length_231_cov_1.126374_g13014_i0 PRJNA1008624 13202 231 1.126374 2.60192394 Methanosarcina sp. 2213 Archaea Archaea 127 1.45e-32   NR HET8685948.1 2213 g13014 i0 80.5 1 77 15 100 0 231 1 74 150 HET8685948.1 phage terminase large subunit [Methanosarcina sp.] diamond 231 127 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
27382281 27382281 PRJNA1008624_P_NODE_30523_length_166_cov_1.743590_g30335_i0 PRJNA1008624 30523 166 1.74359 2.8943594 Methanobacteriota archaeon 2026739 Archaea Archaea 61.6 2.9e-9   NR NDB64671.1 2026739 g30335 i0 57.4 0.849397590361446 47 20 84.9 0 163 23 1597 1643 NDB64671.1 SDR family NAD(P)-dependent oxidoreductase [Methanobacteriota archaeon] diamond 141 61.6 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
30097581 30097581 PRJNA1008624_P_NODE_15872_length_213_cov_0.932927_g15684_i0 PRJNA1008624 15872 213 0.932927 1.98713451 Methanosarcina sp. 2213 Archaea Archaea 87.4 1.8e-19   NR HET8687536.1 2213 g15684 i0 57.6 0.929577464788732 66 27 93 1 200 3 84 148 HET8687536.1 hypothetical protein [Methanosarcina sp.] diamond 198 87.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
30128978 30128978 PRJNA1008624_P_NODE_20252_length_191_cov_1.274648_g20064_i0 PRJNA1008624 20252 191 1.274648 2.43457768 Thermoplasmata archaeon 1906666 Archaea Archaea 67.8 2.72e-11   NR MCK4717694.1 1906666 g20064 i0 50 0.942408376963351 60 30 94.2 0 187 8 370 429 MCK4717694.1 hypothetical protein [Thermoplasmata archaeon] diamond 180 67.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31101123 31101123 PRJNA1008624_P_NODE_35095_length_163_cov_0.912281_g34907_i0 PRJNA1008624 35095 163 0.912281 1.48701803 root 1 Root_unresolved Root_unresolved 102 6.139999999999999e-24   NR OPY47876.1 1811726 g34907 i0 82.4 8.42944785276074 51 9 93.9 0 6 158 233 283 OPY47876.1 MAG: hypothetical protein A4E42_00230 [Methanoregulaceae archaeon PtaU1.Bin222] diamond 1374 102 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon PtaU1.Bin222
31354276 31354276 PRJNA1008624_P_NODE_26376_length_171_cov_1.131148_g26188_i0 PRJNA1008624 26376 171 1.131148 1.93426308 root 1 Root_unresolved Root_unresolved 55.8 3.27e-7   NR HET8686566.1 2213 g26188 i0 67.6 1.78947368421053 34 11 59.6 0 106 5 1 34 HET8686566.1 hypothetical protein [Methanosarcina sp.] diamond 306 55.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;