RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1008624" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA1008624 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30350991 30350991 PRJNA1008624_P_NODE_6092_length_341_cov_1.229452_g5904_i0 PRJNA1008624 6092 341 1.229452 4.19243132 Ostreococcus tauri virus 19-T2 3378374 Viruses Viruses 63.5 6.07e-9   NR XKM50741.1 3378374 g5904 i0 33.3 1.08211143695015 123 59 98.5 3 4 339 1338 1448 XKM50741.1 hypothetical protein OtV19-T2_00071 [Ostreococcus tauri virus 19-T2] diamond 369 63.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Ostreococcus tauri virus 19-T2
31424906 31424906 PRJNA1008624_P_NODE_27296_length_169_cov_0.866667_g27108_i0 PRJNA1008624 27296 169 0.866667 1.46466723 Marseillevirus LCMAC2 2506606 Viruses Viruses 78.6 8.11e-16   NR QBK87919.1 2506606 g27108 i0 81.4 0.763313609467456 43 8 76.3 0 2 130 214 256 QBK87919.1 MAG: hypothetical protein LCMAC202_02800 [Marseillevirus LCMAC202] diamond 129 78.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Marseilleviridae   Marseillevirus LCMAC202

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;