RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1008624" and tax_clade = "Candidatus Pacearchaeota"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Candidatus Pacearchaeota · 2 ✖

bioproject 1

  • PRJNA1008624 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_phylum 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29465680 29465680 PRJNA1008624_P_NODE_29690_length_167_cov_0.881356_g29502_i0 PRJNA1008624 29690 167 0.881356 1.47186452 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 83.6 5.42e-17   NR MAH47872.1 2026773 g29502 i0 68.5 0.970059880239521 54 17 97 0 1 162 522 575 MAH47872.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 162 83.6 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
30065986 30065986 PRJNA1008624_P_NODE_14072_length_224_cov_1.342857_g13884_i0 PRJNA1008624 14072 224 1.342857 3.00799968 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 50.8 1.32e-5   NR MCK9569036.1 2026773 g13884 i0 55.6 0.964285714285714 36 16 48.2 0 115 222 97 132 MCK9569036.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 216 50.8 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;