RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1008049" and tax_phylum = "Uroviricota"

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tax_superkingdom 1

tax_phylum 1

  • Uroviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1008049 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31298368 31298368 PRJNA1008049_S_NODE_4855_length_152_cov_8.284553_g4837_i0 PRJNA1008049 4855 152 8.284553 12.59252056 Caudoviricetes sp. 2832643 Viruses Viruses 66.2 4.16e-11   NR DAV36789.1 2832643 g4837 i0 65.3 0.967105263157895 49 17 96.7 0 152 6 228 276 DAV36789.1 MAG TPA: Protein of unknown function (DUF3232) [Caudoviricetes sp.] diamond 147 66.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
31329992 31329992 PRJNA1008049_S_NODE_1656_length_188_cov_4.132075_g1638_i0 PRJNA1008049 1656 188 4.132075 7.768301 Caudoviricetes sp. 2832643 Viruses Viruses 80.5 8.88e-16   NR DAF07814.1 2832643 g1638 i0 68.3 0.957446808510638 60 17 95.7 1 180 1 902 959 DAF07814.1 MAG TPA: Putative virion structural protein 2 [Caudoviricetes sp.] diamond 180 80.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;