RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1005695" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1005695 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27319103 27319103 PRJNA1005695_P_NODE_29963_length_272_cov_4.994975_g29111_i0 PRJNA1005695 29963 272 4.994975 13.586332 Candidatus Anoxychlamydiales bacterium 2705072 Bacteria Bacteria 43.1 0.0376   NR NGX48595.1 2705072 g29111 i0 32.3 0.716911764705882 65 44 71.7 0 260 66 123 187 NGX48595.1 hypothetical protein [Candidatus Anoxychlamydiales bacterium] diamond 195 43.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Candidatus Anoxychlamydiales     Candidatus Anoxychlamydiales bacterium
32564109 32564109 PRJNA1005695_P_NODE_40099_length_242_cov_0.923077_g39247_i0 PRJNA1005695 40099 242 0.923077 2.23384634 Chlamydiota bacterium 2081524 Bacteria Bacteria 55.5 1.23e-6   NR MCX6988744.1 2081524 g39247 i0 41.7 1.04132231404959 84 40 93 2 5 229 767 850 MCX6988744.1 protein translocase subunit SecD [Chlamydiota bacterium] diamond 252 55.5 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;