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contig_metadata

34 rows where analysis = "diamond", bioproject = "PRJNA1005695" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 34 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1005695 · 34 ✖

analysis 1

  • diamond · 34 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6531613 6531613 PRJNA1005695_P_NODE_20646_length_332_cov_1.196911_g19794_i0 PRJNA1005695 20646 332 1.196911 3.97374452 Bacteroidaceae bacterium 2212467 Bacteria Bacteria 91.7 2.34e-19   NR MBQ1816578.1 2212467 g19794 i0 50.9 3.97590361445783 110 30 99.4 2 330 1 20 105 MBQ1816578.1 UDP-glucose 4-epimerase GalE [Bacteroidaceae bacterium] diamond 1320 91.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae   Bacteroidaceae bacterium
6531745 6531745 PRJNA1005695_P_NODE_34246_length_254_cov_1.718232_g33394_i0 PRJNA1005695 34246 254 1.718232 4.36430928 Bacteroidota bacterium 1898104 Bacteria Bacteria 160 4.2e-48   NR MBL0342960.1 1898104 g33394 i0 86.9 0.992125984251969 84 11 99.2 0 1 252 58 141 MBL0342960.1 GTP-binding protein [Bacteroidota bacterium] diamond 252 160 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
7806156 7806156 PRJNA1005695_P_NODE_36667_length_249_cov_0.886364_g35815_i0 PRJNA1005695 36667 249 0.886364 2.20704636 Flavobacterium succinicans 29536 Bacteria Bacteria 137 2.68e-37   NR WP_024982236.1 29536 g35815 i0 87.8 0.987951807228916 82 10 98.8 0 247 2 130 211 WP_024982236.1 electron transfer flavoprotein subunit alpha/FixB family protein [Flavobacterium succinicans] diamond 246 137 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium succinicans
10356603 10356603 PRJNA1005695_P_NODE_19969_length_338_cov_1.177358_g19117_i0 PRJNA1005695 19969 338 1.177358 3.97947004 Flavobacterium sp. LM5 1938610 Bacteria Bacteria 238 5.5199999999999997e-76   NR WP_223253679.1 1938610 g19117 i0 100 0.994082840236686 112 0 99.4 0 2 337 124 235 WP_223253679.1 glycoside hydrolase family 18 protein [Flavobacterium sp. LM5] diamond 336 238 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. LM5
12907300 12907300 PRJNA1005695_P_NODE_34751_length_253_cov_0.866667_g33899_i0 PRJNA1005695 34751 253 0.866667 2.19266751 Barnesiellaceae 2005519 Bacteria Bacteria 111 7.109999999999999e-28   NR WP_297303935.1 1720550 g33899 i0 73.6 2.57312252964427 72 19 85.4 0 251 36 189 260 WP_297303935.1 type I methionyl aminopeptidase [uncultured Coprobacter sp.] diamond 651 111 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Barnesiellaceae Coprobacter uncultured Coprobacter sp.
14182135 14182135 PRJNA1005695_P_NODE_19592_length_341_cov_1.921642_g18740_i0 PRJNA1005695 19592 341 1.921642 6.55279922 Flavobacterium 237 Bacteria Bacteria 234 4.15e-69   NR WP_024981211.1 237 g18740 i0 98.2 0.994134897360704 113 2 99.4 0 2 340 597 709 WP_024981211.1 MULTISPECIES: SusC/RagA family TonB-linked outer membrane protein [Flavobacterium] diamond 339 234 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium  
21830422 21830422 PRJNA1005695_P_NODE_39138_length_244_cov_0.912281_g38286_i0 PRJNA1005695 39138 244 0.912281 2.22596564 Flavobacterium sp. LM5 1938610 Bacteria Bacteria 154 4.5299999999999986e-43   NR WP_078210968.1 1938610 g38286 i0 97.5 0.983606557377049 80 2 98.4 0 242 3 26 105 WP_078210968.1 rod shape-determining protein RodA [Flavobacterium sp. LM5] diamond 240 154 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. LM5
22678014 22678014 PRJNA1005695_P_NODE_38038_length_246_cov_0.901734_g37186_i0 PRJNA1005695 38038 246 0.901734 2.21826564 Flavobacterium oreochromis 2906078 Bacteria Bacteria 153 1.8499999999999998e-42   NR WP_405346947.1 2906078 g37186 i0 97.5 0.98780487804878 81 2 98.8 0 245 3 236 316 WP_405346947.1 preprotein translocase subunit SecY [Flavobacterium oreochromis] diamond 243 153 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium oreochromis
24379518 24379518 PRJNA1005695_P_NODE_24340_length_304_cov_2.021645_g23488_i0 PRJNA1005695 24340 304 2.021645 6.1458008 Flavobacterium 237 Bacteria Bacteria 198 1.34e-56   NR WP_024981211.1 237 g23488 i0 97 0.996710526315789 101 3 99.7 0 304 2 187 287 WP_024981211.1 MULTISPECIES: SusC/RagA family TonB-linked outer membrane protein [Flavobacterium] diamond 303 198 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium  
26876555 26876555 PRJNA1005695_P_NODE_39121_length_244_cov_0.912281_g38269_i0 PRJNA1005695 39121 244 0.912281 2.22596564 Phocaeicola sartorii 671267 Bacteria Bacteria 97.8 1.61e-21   NR WP_244964569.1 671267 g38269 i0 58.5 3.95901639344262 82 33 99.6 1 2 244 235 316 WP_244964569.1 SusC/RagA family TonB-linked outer membrane protein [Phocaeicola sartorii] diamond 966 97.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola sartorii
26939386 26939386 PRJNA1005695_P_NODE_37062_length_248_cov_0.891429_g36210_i0 PRJNA1005695 37062 248 0.891429 2.21074392 Flavobacterium succinicans 29536 Bacteria Bacteria 156 6.31e-45   NR WP_024982236.1 29536 g36210 i0 100 0.991935483870968 82 0 99.2 0 246 1 98 179 WP_024982236.1 electron transfer flavoprotein subunit alpha/FixB family protein [Flavobacterium succinicans] diamond 246 156 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium succinicans
27065954 27065954 PRJNA1005695_P_NODE_14342_length_403_cov_1.724242_g13490_i0 PRJNA1005695 14342 403 1.724242 6.94869526 Tannerellaceae bacterium 2785930 Bacteria Bacteria 62.4 3.02e-8   NR MDR0749199.1 2785930 g13490 i0 36.4 0.796526054590571 107 51 77.4 6 44 355 8 100 MDR0749199.1 4-alpha-glucanotransferase [Tannerellaceae bacterium] diamond 321 62.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae   Tannerellaceae bacterium
27666499 27666499 PRJNA1005695_P_NODE_18304_length_353_cov_2.896429_g17452_i0 PRJNA1005695 18304 353 2.896429 10.22439437 Muribaculaceae bacterium 2498093 Bacteria Bacteria 86.7 1.49e-17   NR MCX4259549.1 2498093 g17452 i0 53.3 1.52974504249292 90 41 76.5 1 84 353 3 91 MCX4259549.1 3-phosphoglycerate dehydrogenase [Muribaculaceae bacterium] diamond 540 86.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Muribaculaceae   Muribaculaceae bacterium
27824376 27824376 PRJNA1005695_P_NODE_38944_length_244_cov_1.362573_g38092_i0 PRJNA1005695 38944 244 1.362573 3.32467812 Polluticaenibacter yanchengensis 3014562 Bacteria Bacteria 128 4.42e-36   NR WP_407031455.1 3014562 g38092 i0 94 0.823770491803279 67 4 82.4 0 202 2 1 67 WP_407031455.1 50S ribosomal protein L16 [Polluticaenibacter yanchengensis] diamond 201 128 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Polluticaenibacter Polluticaenibacter yanchengensis
27974607 27974607 PRJNA1005695_P_NODE_12685_length_432_cov_1.086351_g11833_i0 PRJNA1005695 12685 432 1.086351 4.69303632 Flavobacterium 237 Bacteria Bacteria 235 3.21e-76   NR WP_035717748.1 237 g11833 i0 81.8 1.98611111111111 143 26 99.3 0 1 429 29 171 WP_035717748.1 MULTISPECIES: ExbD/TolR family protein [Flavobacterium] diamond 858 235 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium  
28076693 28076693 PRJNA1005695_P_NODE_35045_length_252_cov_1.223464_g34193_i0 PRJNA1005695 35045 252 1.223464 3.08312928 Flavobacterium sp. LM5 1938610 Bacteria Bacteria 147 7.22e-40   NR WP_078211377.1 1938610 g34193 i0 85.5 0.988095238095238 83 12 98.8 0 250 2 338 420 WP_078211377.1 SusD/RagB family nutrient-binding outer membrane lipoprotein [Flavobacterium sp. LM5] diamond 249 147 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. LM5
28676827 28676827 PRJNA1005695_P_NODE_36067_length_250_cov_0.881356_g35215_i0 PRJNA1005695 36067 250 0.881356 2.20339 Flavobacterium sp. 239 Bacteria Bacteria 150 3.83e-43   NR WP_298296674.1 239 g35215 i0 93.8 1.92 80 5 96 0 2 241 185 264 WP_298296674.1 undecaprenyl-diphosphate phosphatase [Flavobacterium sp.] diamond 480 150 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
28866116 28866116 PRJNA1005695_P_NODE_38328_length_245_cov_1.813953_g37476_i0 PRJNA1005695 38328 245 1.813953 4.44418485 Flavobacterium succinicans 29536 Bacteria Bacteria 150 3.68e-40   NR WP_024982681.1 29536 g37476 i0 98.8 0.991836734693878 81 1 99.2 0 245 3 210 290 WP_024982681.1 formate C-acetyltransferase [Flavobacterium succinicans] diamond 243 150 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium succinicans
28961145 28961145 PRJNA1005695_P_NODE_41688_length_228_cov_2.767742_g40836_i0 PRJNA1005695 41688 228 2.767742 6.31045176 Flavobacterium sp. LM5 1938610 Bacteria Bacteria 157 6.11e-44   NR WP_078211377.1 1938610 g40836 i0 100 0.986842105263158 75 0 98.7 0 227 3 423 497 WP_078211377.1 SusD/RagB family nutrient-binding outer membrane lipoprotein [Flavobacterium sp. LM5] diamond 225 157 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. LM5
29174574 29174574 PRJNA1005695_P_NODE_13709_length_413_cov_1.835294_g12857_i0 PRJNA1005695 13709 413 1.835294 7.57976422 Alistipes 239759 Bacteria Bacteria 132 1.4e-33   NR WP_300704931.1 538949 g12857 i0 50.7 10.634382566586 136 64 98.8 2 1 408 271 403 WP_300704931.1 cysteate synthase [uncultured Alistipes sp.] diamond 4392 133 0.992481203007519 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Rikenellaceae Alistipes uncultured Alistipes sp.
29364018 29364018 PRJNA1005695_P_NODE_13109_length_424_cov_3.048433_g12257_i0 PRJNA1005695 13109 424 3.048433 12.92535592 Tenuifilaceae 2760872 Bacteria Bacteria 103 6.749999999999999e-23   NR OFY36820.1 1797344 g12257 i0 56.8 8.06603773584906 88 38 62.3 0 422 159 398 485 OFY36820.1 MAG: malate dehydrogenase [Bacteroidetes bacterium GWF2_38_335] diamond 3420 103 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidetes bacterium GWF2_38_335
29490032 29490032 PRJNA1005695_P_NODE_27130_length_287_cov_1.542056_g26278_i0 PRJNA1005695 27130 287 1.542056 4.42570072 Pseudomonadati 3379134 Bacteria Bacteria 112 7.42e-28   NR MDD3738257.1 2026756 g26278 i0 61.3 13.6620209059233 93 36 97.2 0 5 283 105 197 MDD3738257.1 NAD(P)-dependent oxidoreductase [Lentimicrobiaceae bacterium] diamond 3921 112 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Lentimicrobiaceae   Lentimicrobiaceae bacterium
29560592 29560592 PRJNA1005695_P_NODE_21430_length_325_cov_1.793651_g20578_i0 PRJNA1005695 21430 325 1.793651 5.82936575 Bacteroidota bacterium 1898104 Bacteria Bacteria 52 3.02e-5   NR RMG58500.1 1898104 g20578 i0 38.8 1.46769230769231 85 39 71.1 5 1 231 47 126 RMG58500.1 MAG: hypothetical protein D6722_23485 [Bacteroidota bacterium] diamond 477 52 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
29686765 29686765 PRJNA1005695_P_NODE_2630_length_982_cov_4.866887_g2063_i0 PRJNA1005695 2630 982 4.866887 47.79283034 Paludibacteraceae bacterium 2748031 Bacteria Bacteria 63.9 1.26e-7   NR MBO4531769.1 2748031 g2063 i0 39.7 0.238289205702648 78 45 23.2 1 3 230 185 262 MBO4531769.1 AAA family ATPase [Paludibacteraceae bacterium] diamond 234 63.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Paludibacteraceae   Paludibacteraceae bacterium
29813246 29813246 PRJNA1005695_P_NODE_18531_length_351_cov_1.424460_g17679_i0 PRJNA1005695 18531 351 1.42446 4.9998546 Prolixibacteraceae bacterium 2053594 Bacteria Bacteria 96.3 1.28e-20   NR MBN1819165.1 2053594 g17679 i0 59.1 0.752136752136752 88 31 75.2 3 298 35 68 150 MBN1819165.1 cysteate synthase [Prolixibacteraceae bacterium] diamond 264 96.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Marinilabiliales Prolixibacteraceae   Prolixibacteraceae bacterium
29813261 29813261 PRJNA1005695_P_NODE_31011_length_268_cov_1.594872_g30159_i0 PRJNA1005695 31011 268 1.594872 4.27425696 Dyadobacter fermentans 94254 Bacteria Bacteria 101 8.250000000000001e-26   NR WP_223409707.1 94254 g30159 i0 100 1.57835820895522 47 0 52.6 0 126 266 1 47 WP_223409707.1 hypothetical protein [Dyadobacter fermentans] diamond 423 101 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Spirosomataceae Dyadobacter Dyadobacter fermentans
29971275 29971275 PRJNA1005695_P_NODE_31711_length_265_cov_1.437500_g30859_i0 PRJNA1005695 31711 265 1.4375 3.809375 Bacteroidaceae bacterium 2212467 Bacteria Bacteria 43.1 0.0366   NR MBR3093506.1 2212467 g30859 i0 33.3 0.747169811320755 66 33 73.6 2 50 244 479 534 MBR3093506.1 hypothetical protein [Bacteroidaceae bacterium] diamond 198 43.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae   Bacteroidaceae bacterium
31203061 31203061 PRJNA1005695_P_NODE_4995_length_711_cov_2.722571_g4209_i0 PRJNA1005695 4995 711 2.722571 19.35747981 Flavobacteriales bacterium 2021391 Bacteria Bacteria 48.1 0.00653   NR MBT6698848.1 2021391 g4209 i0 25.7 1.23206751054852 136 98 57.4 2 634 227 1 133 MBT6698848.1 hypothetical protein [Flavobacteriales bacterium] diamond 876 48.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales     Flavobacteriales bacterium
31481040 31481040 PRJNA1005695_P_NODE_39036_length_244_cov_0.912281_g38184_i0 PRJNA1005695 39036 244 0.912281 2.22596564 Macellibacteroides 1159323 Bacteria Bacteria 98.6 8.59e-22   NR WP_179399058.1 879969 g38184 i0 60.5 1.99180327868852 81 32 99.6 0 1 243 349 429 WP_179399058.1 TonB-dependent receptor [Macellibacteroides fermentans] diamond 486 98.6 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Macellibacteroides Macellibacteroides fermentans
31544072 31544072 PRJNA1005695_P_NODE_11796_length_451_cov_1.582011_g10944_i0 PRJNA1005695 11796 451 1.582011 7.13486961 root 1 Root_unresolved Root_unresolved 80.1 3.07e-14   NR MBO4531767.1 2748031 g10944 i0 33.3 1.97560975609756 150 90 99.1 2 449 3 3 143 MBO4531767.1 hypothetical protein [Paludibacteraceae bacterium] diamond 891 80.5 0.995031055900621 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Paludibacteraceae   Paludibacteraceae bacterium
31772784 31772784 PRJNA1005695_P_NODE_35717_length_251_cov_0.876404_g34865_i0 PRJNA1005695 35717 251 0.876404 2.19977404 Porphyromonas canoris 36875 Bacteria Bacteria 167 6.4899999999999996e-46   NR WP_036789373.1 36875 g34865 i0 98.8 0.99203187250996006 83 1 99.2 0 3 251 638 720 WP_036789373.1 ribonucleoside-diphosphate reductase subunit alpha [Porphyromonas canoris] diamond 249 167 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas Porphyromonas canoris
31804366 31804366 PRJNA1005695_P_NODE_39157_length_244_cov_0.912281_g38305_i0 PRJNA1005695 39157 244 0.912281 2.22596564 Cytophagaceae bacterium 2026729 Bacteria Bacteria 125 9.6e-33   NR MCS6822971.1 2026729 g38305 i0 68.8 1.95491803278689 80 25 98.4 0 242 3 97 176 MCS6822971.1 aldo/keto reductase [Cytophagaceae bacterium] diamond 477 125 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cytophagaceae   Cytophagaceae bacterium
32121023 32121023 PRJNA1005695_P_NODE_35738_length_251_cov_0.876404_g34886_i0 PRJNA1005695 35738 251 0.876404 2.19977404 Flavobacterium succinicans 29536 Bacteria Bacteria 167 5.84e-49   NR WP_024980560.1 29536 g34886 i0 100 0.99203187250996006 83 0 99.2 0 2 250 44 126 WP_024980560.1 ferredoxin--NADP reductase [Flavobacterium succinicans] diamond 249 167 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium succinicans
32525083 32525083 PRJNA1005695_P_NODE_36179_length_250_cov_0.881356_g35327_i0 PRJNA1005695 36179 250 0.881356 2.20339 Bacteroides 816 Bacteria Bacteria 70.5 6.2e-12   NR MBP3669421.1 29523 g35327 i0 64.3 2.304 56 20 67.2 0 248 81 73 128 MBP3669421.1 HU family DNA-binding protein [Bacteroides sp.] diamond 576 70.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;