RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA1005695" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 12 ✖

bioproject 1

  • PRJNA1005695 · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15456138 15456138 PRJNA1005695_P_NODE_25033_length_300_cov_1.352423_g24181_i0 PRJNA1005695 25033 300 1.352423 4.057269 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 127 1.15e-31   NR CCW64685.1 479712 g24181 i0 62.5 2.84 96 36 96 0 11 298 371 466 CCW64685.1 unnamed protein product [Phytomonas sp. EM1] diamond 852 127 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Phytomonas Phytomonas sp. EM1
27792767 27792767 PRJNA1005695_P_NODE_35004_length_252_cov_1.458101_g34152_i0 PRJNA1005695 35004 252 1.458101 3.67441452 Euglena gracilis 3039 Euglenozoa other_Eukaryota 86.3 9.11e-18   NR WJH19528.1 3039 g34152 i0 47.5 0.952380952380952 80 42 95.2 0 11 250 107 186 WJH19528.1 Mitotic checkpoint protein BUB3 [Euglena gracilis] diamond 240 86.3 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
28076686 28076686 PRJNA1005695_P_NODE_29245_length_276_cov_2.068966_g28393_i0 PRJNA1005695 29245 276 2.068966 5.71034616 Acrasis kona 1008807 Heterolobosea other_Eukaryota 66.6 3.42e-11   NR KAL0485049.1 1008807 g28393 i0 42.1 0.826086956521739 76 43 81.5 1 227 3 1 76 KAL0485049.1 thioredoxin domain-containing protein [Acrasis kona] diamond 228 66.6 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
28543167 28543167 PRJNA1005695_P_NODE_25947_length_294_cov_1.977376_g25095_i0 PRJNA1005695 25947 294 1.977376 5.81348544 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 45.1 0.0109   NR XP_002670167.1 5762 g25095 i0 33.8 1.79591836734694 77 48 77.6 2 11 238 1163 1237 XP_002670167.1 uncharacterized protein NAEGRDRAFT_74840 [Naegleria gruberi] diamond 528 45.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29813250 29813250 PRJNA1005695_P_NODE_22131_length_319_cov_2.430894_g21279_i0 PRJNA1005695 22131 319 2.430894 7.75455186 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 56.2 1.53e-6   NR RNC44100.1 5693 g21279 i0 37.9 3.29153605015674 87 48 76.2 3 317 75 286 372 RNC44100.1 protein kinase [Trypanosoma cruzi] diamond 1050 56.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
30753754 30753754 PRJNA1005695_P_NODE_30174_length_272_cov_1.175879_g29322_i0 PRJNA1005695 30174 272 1.175879 3.19839088 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 66.6 1.83e-10   NR XP_002670123.1 5762 g29322 i0 36.1 3.01102941176471 83 53 91.5 0 271 23 70 152 XP_002670123.1 uncharacterized protein NAEGRDRAFT_81952 [Naegleria gruberi] diamond 819 66.6 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30975032 30975032 PRJNA1005695_P_NODE_31934_length_264_cov_1.549738_g31082_i0 PRJNA1005695 31934 264 1.549738 4.0913083200000004 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 58.5 1.35e-7   NR XP_002671311.1 5762 g31082 i0 29.9 3.96590909090909 87 61 98.9 0 2 262 2222 2308 XP_002671311.1 uncharacterized protein NAEGRDRAFT_52947 [Naegleria gruberi] diamond 1047 58.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31132564 31132564 PRJNA1005695_P_NODE_37015_length_248_cov_0.891429_g36163_i0 PRJNA1005695 37015 248 0.891429 2.21074392 Trypanosoma 5690 Euglenozoa other_Eukaryota 69.3 1.7e-11   NR XP_009307139.1 71804 g36163 i0 52.9 4.62096774193548 68 29 78.6 1 17 211 253 320 XP_009307139.1 putative dynamin, putative,vacuolar sortin protein 1 [Trypanosoma grayi] diamond 1146 69.7 0.994261119081779 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
31835919 31835919 PRJNA1005695_P_NODE_35537_length_251_cov_0.876404_g34685_i0 PRJNA1005695 35537 251 0.876404 2.19977404 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 85.9 2.13e-17   NR KAJ9460418.1 91374 g34685 i0 55.7 0.944223107569721 79 32 93.2 2 241 8 246 322 KAJ9460418.1 Ornithine decarboxylase [Diplonema papillatum] diamond 237 85.9 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
32152553 32152553 PRJNA1005695_P_NODE_37038_length_248_cov_0.891429_g36186_i0 PRJNA1005695 37038 248 0.891429 2.21074392 Euglena gracilis 3039 Euglenozoa other_Eukaryota 137 1.24e-38   NR 6ZJ3_SI 3039 g36186 i0 78 0.991935483870968 82 18 99.2 0 247 2 115 196 6ZJ3_SI Chain SI, Ribosomal protein eS7 [Euglena gracilis] diamond 246 137 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
32279284 32279284 PRJNA1005695_P_NODE_29119_length_277_cov_1.465686_g28267_i0 PRJNA1005695 29119 277 1.465686 4.05995022 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 138 1.32e-36   NR KAJ9467333.1 91374 g28267 i0 66.3 0.996389891696751 92 31 99.6 0 2 277 184 275 KAJ9467333.1 Tryptophan--tRNA ligase [Diplonema papillatum] diamond 276 138 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
32469133 32469133 PRJNA1005695_P_NODE_26319_length_292_cov_1.068493_g25467_i0 PRJNA1005695 26319 292 1.068493 3.11999956 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 61.2 2.21e-8   NR XP_044549094.1 51637 g25467 i0 42.5 0.75 73 41 75 1 1 219 1573 1644 XP_044549094.1 uncharacterized protein C9374_004086 [Naegleria lovaniensis] diamond 219 61.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;