RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1004255" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1004255 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5256166 5256166 PRJNA1004255_S_NODE_3525_length_296_cov_4.948617_g3317_i0 PRJNA1004255 3525 296 4.948617 14.64790632 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 105 2e-25   NR HXM98847.1 2052315 g3317 i0 76.1 0.679054054054054 67 16 67.9 0 201 1 1 67 HXM98847.1 ThuA domain-containing protein [Candidatus Dormiibacterota bacterium] diamond 201 105 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
27375046 27375046 PRJNA1004255_S_NODE_12983_length_179_cov_2.764706_g12775_i0 PRJNA1004255 12983 179 2.764706 4.94882374 Bacteria 2 Bacteria Bacteria 117 1.22e-30   NR HXJ45711.1 2052315 g12775 i0 88.1 4.94413407821229 59 7 98.9 0 177 1 183 241 HXJ45711.1 transporter [Candidatus Dormiibacterota bacterium] diamond 885 117 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
27855705 27855705 PRJNA1004255_S_NODE_6585_length_238_cov_1.887179_g6377_i0 PRJNA1004255 6585 238 1.887179 4.49148602 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 97.4 2.01e-21   NR HXM94326.1 2052315 g6377 i0 60.6 0.894957983193277 71 28 89.5 0 22 234 188 258 HXM94326.1 ATP-binding protein [Candidatus Dormiibacterota bacterium] diamond 213 97.4 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
32335153 32335153 PRJNA1004255_S_NODE_5119_length_261_cov_2.802752_g4911_i0 PRJNA1004255 5119 261 2.802752 7.31518272 Bacteria 2 Bacteria Bacteria 99 3.9e-24   NR HWZ97840.1 2052315 g4911 i0 57 5.95402298850575 86 37 98.9 0 2 259 41 126 HWZ97840.1 low molecular weight phosphatase family protein [Candidatus Dormiibacterota bacterium] diamond 1554 100 0.99 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;