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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA1004255" and tax_phylum = "Bacillota"

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tax_superkingdom 1

tax_phylum 1

  • Bacillota · 13 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1004255 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14181948 14181948 PRJNA1004255_S_NODE_3292_length_303_cov_2.892308_g3084_i0 PRJNA1004255 3292 303 2.892308 8.76369324 Anaerococcus 165779 Bacteria Bacteria 191 5.55e-58   NR WP_101539319.1 165779 g3084 i0 94.1 1 101 6 100 0 303 1 79 179 WP_101539319.1 MULTISPECIES: electron transfer flavoprotein subunit alpha/FixB family protein [Anaerococcus] diamond 303 191 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Anaerococcus  
27287315 27287315 PRJNA1004255_S_NODE_14103_length_172_cov_11.449612_g13895_i0 PRJNA1004255 14103 172 11.449612 19.69333264 Tissierellia bacterium 2049431 Bacteria Bacteria 82 1.25e-16   NR NLW43105.1 2049431 g13895 i0 67.9 2.93023255813953 56 18 97.7 0 170 3 59 114 NLW43105.1 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase [Tissierellia bacterium] diamond 504 82 1 Bacteria   Bacillati Bacillota Tissierellia       Tissierellia bacterium
27824345 27824345 PRJNA1004255_S_NODE_2444_length_334_cov_5.707904_g2236_i0 PRJNA1004255 2444 334 5.707904 19.06439936 Blautia sp. An46 1965636 Bacteria Bacteria 201 1.04e-61   NR WP_242971269.1 1965636 g2236 i0 96.4 0.997005988023952 111 4 99.7 0 334 2 12 122 WP_242971269.1 DUF5979 domain-containing protein [Blautia sp. An46] diamond 333 201 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia sp. An46
29560574 29560574 PRJNA1004255_S_NODE_18090_length_153_cov_3.418182_g17882_i0 PRJNA1004255 18090 153 3.418182 5.22981846 Paenibacillus polymyxa SC2 886882 Bacteria Bacteria 46.6 2.64e-4   NR ADO59525.2 886882 g17882 i0 67.7 2.58823529411765 31 9 60.8 1 94 2 110 139 ADO59525.2 hypothetical protein PPSC2_27470 [Paenibacillus polymyxa SC2] diamond 396 46.6 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus polymyxa
30097544 30097544 PRJNA1004255_S_NODE_11632_length_188_cov_2.268966_g11424_i0 PRJNA1004255 11632 188 2.268966 4.26565608 Peptoniphilus sp. 1971214 Bacteria Bacteria 94.7 8.720000000000001e-21   NR WP_412446334.1 1971214 g11424 i0 89.3 0.893617021276596 56 6 89.4 0 170 3 721 776 WP_412446334.1 S-layer homology domain-containing protein [Peptoniphilus sp.] diamond 168 94.7 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Peptoniphilus Peptoniphilus sp.
30097545 30097545 PRJNA1004255_S_NODE_14512_length_170_cov_6.259843_g14304_i0 PRJNA1004255 14512 170 6.259843 10.6417331 Hominiventricola aquisgranensis 3133164 Bacteria Bacteria 63.5 1.76e-10   NR WP_349144885.1 3133164 g14304 i0 100 0.547058823529412 31 0 54.7 0 78 170 1 31 WP_349144885.1 hypothetical protein [Hominiventricola aquisgranensis] diamond 93 63.5 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Hominiventricola Hominiventricola aquisgranensis
30160604 30160604 PRJNA1004255_S_NODE_14572_length_170_cov_3.259843_g14364_i0 PRJNA1004255 14572 170 3.259843 5.5417331 Finegoldia magna 1260 Bacteria Bacteria 103 3.819999999999999e-24   NR WP_412646238.1 1260 g14364 i0 78.6 1.97647058823529 56 12 98.8 0 169 2 680 735 WP_412646238.1 DEAD/DEAH box helicase family protein [Finegoldia magna] diamond 336 103 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Finegoldia Finegoldia magna
30563831 30563831 PRJNA1004255_S_NODE_12513_length_182_cov_2.280576_g12305_i0 PRJNA1004255 12513 182 2.280576 4.15064832 Veillonella 29465 Bacteria Bacteria 47.8 1.24e-4   NR ETJ17454.1 1403932 g12305 i0 54.5 2.12637362637363 44 20 72.5 0 50 181 107 150 ETJ17454.1 MAG: hypothetical protein Q620_VSAC00705G0001, partial [Veillonella sp. DORA_A_3_16_22] diamond 387 47.8 1 Bacteria   Bacillati Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella Veillonella sp. DORA_A_3_16_22
30855912 30855912 PRJNA1004255_S_NODE_8934_length_211_cov_1.958333_g8726_i0 PRJNA1004255 8934 211 1.958333 4.13208263 Clostridium polynesiense 1325933 Bacteria Bacteria 133 2.51e-35   NR WP_040212244.1 1325933 g8726 i0 92.9 0.995260663507109 70 5 99.5 0 211 2 33 102 WP_040212244.1 ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium polynesiense] diamond 210 133 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium polynesiense
30919309 30919309 PRJNA1004255_S_NODE_4274_length_278_cov_2.000000_g4066_i0 PRJNA1004255 4274 278 2 5.56 Anaerococcus 165779 Bacteria Bacteria 72 3.59e-13   NR WP_219350665.1 165779 g4066 i0 100 0.399280575539568 37 0 39.9 0 278 168 73 109 WP_219350665.1 MULTISPECIES: hypothetical protein [Anaerococcus] diamond 111 72 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Anaerococcus  
31139928 31139928 PRJNA1004255_S_NODE_5735_length_250_cov_5.246377_g5527_i0 PRJNA1004255 5735 250 5.246377 13.1159425 Staphylococcus sp. GDB8P25P 2804446 Bacteria Bacteria 41.2 0.0216   NR WP_204254755.1 2804446 g5527 i0 58.8 0.408 34 13 40.8 1 103 2 1 33 WP_204254755.1 hypothetical protein, partial [Staphylococcus sp. GDB8P25P] diamond 102 41.2 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus sp. GDB8P25P
31203030 31203030 PRJNA1004255_S_NODE_18155_length_153_cov_1.709091_g17947_i0 PRJNA1004255 18155 153 1.709091 2.61490923 Tissierellia bacterium 2049431 Bacteria Bacteria 79.7 6.75e-16   NR NLD17735.1 2049431 g17947 i0 77.1 0.941176470588235 48 11 94.1 0 151 8 17 64 NLD17735.1 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase [Tissierellia bacterium] diamond 144 79.7 1 Bacteria   Bacillati Bacillota Tissierellia       Tissierellia bacterium
32089200 32089200 PRJNA1004255_S_NODE_16478_length_160_cov_2.726496_g16270_i0 PRJNA1004255 16478 160 2.726496 4.3623936 Clostridia bacterium 2044939 Bacteria Bacteria 41.6 0.0277   NR MBP5467126.1 2044939 g16270 i0 48.7 0.73125 39 16 65.6 1 47 151 40 78 MBP5467126.1 SGNH/GDSL hydrolase family protein [Clostridia bacterium] diamond 117 41.6 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;