contig_metadata
53 rows where analysis = "diamond", bioproject = "PRJNA1004255" and tax_kingdom = "Pseudomonadati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 153257 | 153257 | PRJNA1004255_S_NODE_16461_length_160_cov_3.273504_g16253_i0 | PRJNA1004255 | 16461 | 160 | 3.273504 | 5.2376064 | Prevotella pectinovora | 1602169 | Bacteria | Bacteria | 100 | 3.929999999999999e-23 | NR | WP_044074180.1 | 1602169 | g16253 | i0 | 100 | 1.725 | 46 | 0 | 86.3 | 0 | 23 | 160 | 1 | 46 | WP_044074180.1 glutamine--fructose-6-phosphate transaminase (isomerizing) [Prevotella pectinovora] | diamond | 276 | 100 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Prevotellaceae | Prevotella | Prevotella pectinovora | |
| 6104143 | 6104143 | PRJNA1004255_S_NODE_3505_length_297_cov_2.212598_g3297_i0 | PRJNA1004255 | 3505 | 297 | 2.212598 | 6.57141606 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 196 | 3.29e-57 | NR | MBS0417227.1 | 1977087 | g3297 | i0 | 99 | 1 | 99 | 1 | 100 | 0 | 1 | 297 | 72 | 170 | MBS0417227.1 phosphogluconate dehydratase [Pseudomonadota bacterium] | diamond | 297 | 196 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 6531400 | 6531400 | PRJNA1004255_S_NODE_13726_length_175_cov_1.068182_g13518_i0 | PRJNA1004255 | 13726 | 175 | 1.068182 | 1.8693185 | Asinibacterium sp. OR53 | 925409 | Bacteria | Bacteria | 116 | 2.57e-29 | NR | WP_232214798.1 | 925409 | g13518 | i0 | 100 | 1.98857142857143 | 58 | 0 | 99.4 | 0 | 174 | 1 | 112 | 169 | WP_232214798.1 Ldh family oxidoreductase [Asinibacterium sp. OR53] | diamond | 348 | 116 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Asinibacterium | Asinibacterium sp. OR53 | |
| 7805779 | 7805779 | PRJNA1004255_S_NODE_10107_length_200_cov_3.566879_g9899_i0 | PRJNA1004255 | 10107 | 200 | 3.566879 | 7.133758 | Adhaeribacter | 299566 | Bacteria | Bacteria | 124 | 1.33e-32 | NR | MDQ3289789.1 | 1898104 | g9899 | i0 | 90.9 | 3.96 | 66 | 6 | 99 | 0 | 3 | 200 | 108 | 173 | MDQ3289789.1 acetyl-CoA carboxylase, carboxyltransferase subunit beta [Bacteroidota bacterium] | diamond | 792 | 125 | 0.992 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 10356401 | 10356401 | PRJNA1004255_S_NODE_13189_length_178_cov_1.740741_g12981_i0 | PRJNA1004255 | 13189 | 178 | 1.740741 | 3.09851898 | FCB group | 1783270 | Bacteria | Bacteria | 112 | 7.31e-31 | NR | MBQ5912914.1 | 2212467 | g12981 | i0 | 92.7 | 5.56179775280899 | 55 | 4 | 92.7 | 0 | 2 | 166 | 11 | 65 | MBQ5912914.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase [Bacteroidaceae bacterium] | diamond | 990 | 112 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroidaceae bacterium | ||
| 10356449 | 10356449 | PRJNA1004255_S_NODE_9289_length_207_cov_5.475610_g9081_i0 | PRJNA1004255 | 9289 | 207 | 5.47561 | 11.3345127 | Hydrobacter penzbergensis | 1235997 | Bacteria | Bacteria | 146 | 8.71e-41 | NR | WP_092723363.1 | 1235997 | g9081 | i0 | 100 | 0.971014492753623 | 67 | 0 | 97.1 | 0 | 207 | 7 | 65 | 131 | WP_092723363.1 formylglycine-generating enzyme family protein [Hydrobacter penzbergensis] | diamond | 201 | 146 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Hydrobacter | Hydrobacter penzbergensis | |
| 11204268 | 11204268 | PRJNA1004255_S_NODE_17649_length_155_cov_2.098214_g17441_i0 | PRJNA1004255 | 17649 | 155 | 2.098214 | 3.2522317 | Bradyrhizobium sp. RD5-C2 | 244562 | Bacteria | Bacteria | 64.7 | 2.98e-11 | NR | WP_223977496.1 | 244562 | g17441 | i0 | 78.9 | 0.735483870967742 | 38 | 8 | 73.5 | 0 | 116 | 3 | 7 | 44 | WP_223977496.1 flavin reductase family protein [Bradyrhizobium sp. RD5-C2] | diamond | 114 | 64.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. RD5-C2 | ||
| 14181947 | 14181947 | PRJNA1004255_S_NODE_2932_length_314_cov_4.892989_g2724_i0 | PRJNA1004255 | 2932 | 314 | 4.892989 | 15.36398546 | Microvirga | 186650 | Bacteria | Bacteria | 170 | 1.15e-49 | NR | HEV2558174.1 | 1873136 | g2724 | i0 | 74 | 7.9203821656051 | 104 | 27 | 99.4 | 0 | 3 | 314 | 44 | 147 | HEV2558174.1 NADPH:quinone oxidoreductase family protein [Microvirga sp.] | diamond | 2487 | 171 | 0.994152046783626 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Microvirga | Microvirga sp. | ||
| 15455905 | 15455905 | PRJNA1004255_S_NODE_3853_length_287_cov_4.454918_g3645_i0 | PRJNA1004255 | 3853 | 287 | 4.454918 | 12.78561466 | Massilia sp. YIM B | 1882437 | Bacteria | Bacteria | 178 | 1.6299999999999999e-52 | NR | WP_290421552.1 | 3050129 | g3645 | i0 | 100 | 0.857142857142857 | 82 | 0 | 85.7 | 0 | 286 | 41 | 222 | 303 | WP_290421552.1 FAD-dependent oxidoreductase [Massilia sp. YIM B02769] | diamond | 246 | 178 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia sp. YIM B02769 | ||
| 17578818 | 17578818 | PRJNA1004255_S_NODE_3494_length_297_cov_4.948819_g3286_i0 | PRJNA1004255 | 3494 | 297 | 4.948819 | 14.69799243 | Rubrivivax | 28067 | Bacteria | Bacteria | 166 | 2.989999999999999e-47 | NR | MDE2145978.1 | 1891238 | g3286 | i0 | 80.6 | 1.97979797979798 | 98 | 19 | 99 | 0 | 3 | 296 | 316 | 413 | MDE2145978.1 glucose-1-phosphate adenylyltransferase [Burkholderiales bacterium] | diamond | 588 | 167 | 0.994011976047904 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales bacterium | ||||
| 18004988 | 18004988 | PRJNA1004255_S_NODE_2495_length_332_cov_3.415225_g2287_i0 | PRJNA1004255 | 2495 | 332 | 3.415225 | 11.338547 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 206 | 9.76e-64 | NR | MBS0422205.1 | 1977087 | g2287 | i0 | 96.3 | 0.975903614457831 | 108 | 4 | 97.6 | 0 | 330 | 7 | 212 | 319 | MBS0422205.1 ketoacyl-ACP synthase III [Pseudomonadota bacterium] | diamond | 324 | 206 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 20127391 | 20127391 | PRJNA1004255_S_NODE_10136_length_200_cov_2.095541_g9928_i0 | PRJNA1004255 | 10136 | 200 | 2.095541 | 4.191082 | Bradyrhizobium sp. | 376 | Bacteria | Bacteria | 107 | 1.7000000000000002e-27 | NR | WP_324406718.1 | 376 | g9928 | i0 | 77.3 | 1.98 | 66 | 15 | 99 | 0 | 2 | 199 | 87 | 152 | WP_324406718.1 hypothetical protein [Bradyrhizobium sp.] | diamond | 396 | 107 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. | ||
| 20554465 | 20554465 | PRJNA1004255_S_NODE_9037_length_210_cov_1.407186_g8829_i0 | PRJNA1004255 | 9037 | 210 | 1.407186 | 2.9550906 | Gammaproteobacteria bacterium | 1913989 | Bacteria | Bacteria | 86.7 | 7.72e-18 | NR | MEJ0036570.1 | 1913989 | g8829 | i0 | 75 | 0.857142857142857 | 60 | 15 | 85.7 | 0 | 3 | 182 | 24 | 83 | MEJ0036570.1 OmpW family outer membrane protein [Gammaproteobacteria bacterium] | diamond | 180 | 86.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Gammaproteobacteria bacterium | |||||
| 26678568 | 26678568 | PRJNA1004255_S_NODE_5321_length_257_cov_6.369159_g5113_i0 | PRJNA1004255 | 5321 | 257 | 6.369159 | 16.36873863 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 76.6 | 2.82e-15 | NR | HXC24482.1 | 2026741 | g5113 | i0 | 69.2 | 2.94163424124514 | 52 | 16 | 60.7 | 0 | 253 | 98 | 98 | 149 | HXC24482.1 nuclear transport factor 2 family protein [Gemmatimonadaceae bacterium] | diamond | 756 | 77 | 0.994805194805195 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 26971031 | 26971031 | PRJNA1004255_S_NODE_8402_length_216_cov_5.161850_g8194_i0 | PRJNA1004255 | 8402 | 216 | 5.16185 | 11.149596 | Mameliella alba | 561184 | Bacteria | Bacteria | 44.3 | 0.00737 | NR | WP_074622400.1 | 561184 | g8194 | i0 | 44.2 | 0.722222222222222 | 52 | 29 | 72.2 | 0 | 58 | 213 | 72 | 123 | WP_074622400.1 xanthine dehydrogenase accessory protein XdhC [Mameliella alba] | diamond | 156 | 44.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Roseobacteraceae | Mameliella | Mameliella alba | ||
| 27223921 | 27223921 | PRJNA1004255_S_NODE_3503_length_297_cov_3.039370_g3295_i0 | PRJNA1004255 | 3503 | 297 | 3.03937 | 9.0269289 | Candidatus Acidiferrum sp. | 3069120 | Bacteria | Bacteria | 159 | 3.0699999999999992e-43 | NR | HEV3374398.1 | 3069120 | g3295 | i0 | 71.7 | 2 | 99 | 28 | 100 | 0 | 297 | 1 | 360 | 458 | HEV3374398.1 hypothetical protein [Candidatus Acidiferrum sp.] | diamond | 594 | 159 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Candidatus Acidiferrales | Candidatus Acidiferrum | Candidatus Acidiferrum sp. | |||
| 27311729 | 27311729 | PRJNA1004255_S_NODE_4303_length_277_cov_3.615385_g4095_i0 | PRJNA1004255 | 4303 | 277 | 3.615385 | 10.01461645 | Mucilaginibacter | 423349 | Bacteria | Bacteria | 151 | 6.68e-41 | NR | WP_157524534.1 | 2682091 | g4095 | i0 | 82.6 | 1.9927797833935 | 92 | 16 | 99.6 | 0 | 1 | 276 | 377 | 468 | WP_157524534.1 S41 family peptidase [Mucilaginibacter ginkgonis] | diamond | 552 | 151 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Mucilaginibacter | Mucilaginibacter ginkgonis | |
| 27375045 | 27375045 | PRJNA1004255_S_NODE_12463_length_182_cov_4.395683_g12255_i0 | PRJNA1004255 | 12463 | 182 | 4.395683 | 8.00014306 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 97.8 | 1.19e-22 | NR | HUL15191.1 | 2282142 | g12255 | i0 | 81.4 | 2.88461538461538 | 59 | 11 | 97.3 | 0 | 4 | 180 | 4 | 62 | HUL15191.1 ABC transporter ATP-binding protein [Terriglobales bacterium] | diamond | 525 | 98.2 | 0.995926680244399 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Terriglobales bacterium | ||||
| 27887229 | 27887229 | PRJNA1004255_S_NODE_11465_length_189_cov_3.863014_g11257_i0 | PRJNA1004255 | 11465 | 189 | 3.863014 | 7.30109646 | Bacteroides neonati | 1347393 | Bacteria | Bacteria | 54.7 | 1.14e-7 | NR | WP_042372622.1 | 1347393 | g11257 | i0 | 85.7 | 0.444444444444444 | 28 | 4 | 44.4 | 0 | 85 | 2 | 12 | 39 | WP_042372622.1 hypothetical protein [Bacteroides neonati] | diamond | 84 | 54.7 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides neonati | |
| 28360805 | 28360805 | PRJNA1004255_S_NODE_13386_length_176_cov_12.586466_g13178_i0 | PRJNA1004255 | 13386 | 176 | 12.586466 | 22.15218016 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 68.2 | 1.27e-12 | NR | WP_416532323.1 | 573 | g13178 | i0 | 96.9 | 0.545454545454545 | 32 | 1 | 54.5 | 0 | 98 | 3 | 112 | 143 | WP_416532323.1 hypothetical protein, partial [Klebsiella pneumoniae] | diamond | 96 | 68.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 28487334 | 28487334 | PRJNA1004255_S_NODE_11127_length_192_cov_1.261745_g10919_i0 | PRJNA1004255 | 11127 | 192 | 1.261745 | 2.4225504 | Paracoccus marinus | 288426 | Bacteria | Bacteria | 108 | 3.3800000000000003e-29 | NR | WP_131672971.1 | 288426 | g10919 | i0 | 100 | 0.8125 | 52 | 0 | 81.3 | 0 | 192 | 37 | 43 | 94 | WP_131672971.1 DUF2171 domain-containing protein [Paracoccus marinus] | diamond | 156 | 108 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus marinus | ||
| 28669378 | 28669378 | PRJNA1004255_S_NODE_7247_length_229_cov_4.650538_g7039_i0 | PRJNA1004255 | 7247 | 229 | 4.650538 | 10.64973202 | Pseudomonadota | 1224 | Bacteria | Bacteria | 135 | 5.6e-35 | NR | WP_050325840.1 | 225324 | g7039 | i0 | 92.1 | 1.99126637554585 | 76 | 6 | 99.6 | 0 | 228 | 1 | 1224 | 1299 | WP_050325840.1 pilus assembly protein PilY [Enhydrobacter aerosaccus] | diamond | 456 | 135 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Enhydrobacter | Enhydrobacter aerosaccus | |||
| 28739848 | 28739848 | PRJNA1004255_S_NODE_9227_length_208_cov_2.503030_g9019_i0 | PRJNA1004255 | 9227 | 208 | 2.50303 | 5.2063024 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 85.1 | 5.82e-18 | NR | NUM89689.1 | 2053517 | g9019 | i0 | 58.8 | 0.980769230769231 | 68 | 28 | 98.1 | 0 | 208 | 5 | 141 | 208 | NUM89689.1 TIGR02147 family protein [Bdellovibrionales bacterium] | diamond | 204 | 85.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 28866088 | 28866088 | PRJNA1004255_S_NODE_11248_length_191_cov_1.905405_g11040_i0 | PRJNA1004255 | 11248 | 191 | 1.905405 | 3.63932355 | Pseudomonas sp. 74_A | 2813565 | Bacteria | Bacteria | 111 | 1.28e-29 | NR | WP_243433116.1 | 2813565 | g11040 | i0 | 78.3 | 0.942408376963351 | 60 | 13 | 94.2 | 0 | 180 | 1 | 2 | 61 | WP_243433116.1 AP2 domain-containing protein, partial [Pseudomonas sp. 74_A] | diamond | 180 | 111 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. 74_A | ||
| 29024377 | 29024377 | PRJNA1004255_S_NODE_7028_length_232_cov_2.079365_g6820_i0 | PRJNA1004255 | 7028 | 232 | 2.079365 | 4.8241268 | Candidatus Acidiferrum sp. | 3069120 | Bacteria | Bacteria | 89.4 | 2.11e-20 | NR | HKV62756.1 | 3069120 | g6820 | i0 | 70.2 | 2.59913793103448 | 57 | 17 | 73.7 | 0 | 61 | 231 | 1 | 57 | HKV62756.1 DUF3291 domain-containing protein [Candidatus Acidiferrum sp.] | diamond | 603 | 89.4 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Candidatus Acidiferrales | Candidatus Acidiferrum | Candidatus Acidiferrum sp. | |||
| 29150662 | 29150662 | PRJNA1004255_S_NODE_5689_length_251_cov_3.201923_g5481_i0 | PRJNA1004255 | 5689 | 251 | 3.201923 | 8.03682673 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 48.1 | 4.93e-4 | NR | HEV3200494.1 | 2212468 | g5481 | i0 | 38.8 | 0.585657370517928 | 49 | 30 | 58.6 | 0 | 105 | 251 | 6 | 54 | HEV3200494.1 PQQ-binding-like beta-propeller repeat protein [Bryobacteraceae bacterium] | diamond | 147 | 48.1 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 29182054 | 29182054 | PRJNA1004255_S_NODE_3569_length_295_cov_2.603175_g3361_i0 | PRJNA1004255 | 3569 | 295 | 2.603175 | 7.67936625 | Chitinophagaceae bacterium | 1869212 | Bacteria | Bacteria | 163 | 4.5e-47 | NR | MBX9781503.1 | 1869212 | g3361 | i0 | 100 | 0.772881355932203 | 76 | 0 | 77.3 | 0 | 2 | 229 | 272 | 347 | MBX9781503.1 hypothetical protein [Chitinophagaceae bacterium] | diamond | 228 | 163 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophagaceae bacterium | ||
| 29245050 | 29245050 | PRJNA1004255_S_NODE_5229_length_259_cov_2.828704_g5021_i0 | PRJNA1004255 | 5229 | 259 | 2.828704 | 7.32634336 | Rubripirellula lacrimiformis | 1930273 | Bacteria | Bacteria | 43.5 | 0.0257 | NR | WP_218933548.1 | 1930273 | g5021 | i0 | 34.4 | 1.58687258687259 | 61 | 39 | 69.5 | 1 | 35 | 214 | 3173 | 3233 | WP_218933548.1 Calx-beta domain-containing protein [Rubripirellula lacrimiformis] | diamond | 411 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Rubripirellula | Rubripirellula lacrimiformis | |
| 29371375 | 29371375 | PRJNA1004255_S_NODE_8549_length_215_cov_2.459302_g8341_i0 | PRJNA1004255 | 8549 | 215 | 2.459302 | 5.2874993 | Telmatobacter sp. DSM 11 | 2171561 | Bacteria | Bacteria | 67.8 | 3.84e-11 | NR | WP_348262889.1 | 3036704 | g8341 | i0 | 58.6 | 0.976744186046512 | 70 | 29 | 97.7 | 0 | 210 | 1 | 15 | 84 | WP_348262889.1 Ig domain-containing protein [Telmatobacter sp. DSM 110680] | diamond | 210 | 67.8 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Telmatobacter | Telmatobacter sp. DSM 110680 | ||
| 29465633 | 29465633 | PRJNA1004255_S_NODE_12630_length_181_cov_4.427536_g12422_i0 | PRJNA1004255 | 12630 | 181 | 4.427536 | 8.01384016 | Bacteroidota bacterium | 1898104 | Bacteria | Bacteria | 56.6 | 1.86e-7 | NR | MEC8883054.1 | 1898104 | g12422 | i0 | 70.6 | 1.14364640883978 | 34 | 10 | 56.4 | 0 | 76 | 177 | 134 | 167 | MEC8883054.1 DDE-type integrase/transposase/recombinase [Bacteroidota bacterium] | diamond | 207 | 56.6 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 29623400 | 29623400 | PRJNA1004255_S_NODE_2450_length_334_cov_2.969072_g2242_i0 | PRJNA1004255 | 2450 | 334 | 2.969072 | 9.91670048 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 94.4 | 1.57e-20 | NR | PYT51179.1 | 1978231 | g2242 | i0 | 81.8 | 0.988023952095808 | 55 | 10 | 49.4 | 0 | 159 | 323 | 28 | 82 | PYT51179.1 MAG: hypothetical protein DMG44_03620 [Acidobacteriota bacterium] | diamond | 330 | 94.4 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 30058440 | 30058440 | PRJNA1004255_S_NODE_8071_length_220_cov_3.265537_g7863_i0 | PRJNA1004255 | 8071 | 220 | 3.265537 | 7.1841814 | Bacteria | 2 | Bacteria | Bacteria | 42.4 | 0.0177 | NR | MBS1872546.1 | 1978231 | g7863 | i0 | 35.7 | 2.49545454545455 | 56 | 33 | 72.3 | 1 | 201 | 43 | 18 | 73 | MBS1872546.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 549 | 42.7 | 0.992974238875878 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 30097546 | 30097546 | PRJNA1004255_S_NODE_17252_length_157_cov_1.008772_g17044_i0 | PRJNA1004255 | 17252 | 157 | 1.008772 | 1.58377204 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 42.7 | 0.00797 | NR | WP_395515016.1 | 251699 | g17044 | i0 | 56.5 | 0.878980891719745 | 46 | 15 | 84.1 | 2 | 5 | 136 | 60 | 102 | WP_395515016.1 hypothetical protein, partial [Pseudomonas syringae group genomosp. 7] | diamond | 138 | 42.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 30382433 | 30382433 | PRJNA1004255_S_NODE_13133_length_178_cov_4.318519_g12925_i0 | PRJNA1004255 | 13133 | 178 | 4.318519 | 7.68696382 | Shigella sonnei | 624 | Bacteria | Bacteria | 40.8 | 0.0165 | NR | WP_353763804.1 | 624 | g12925 | i0 | 56.8 | 0.741573033707865 | 44 | 16 | 69.1 | 2 | 124 | 2 | 24 | 67 | WP_353763804.1 hypothetical protein, partial [Shigella sonnei] | diamond | 132 | 40.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Shigella | Shigella sonnei | ||
| 30413894 | 30413894 | PRJNA1004255_S_NODE_12353_length_183_cov_3.021429_g12145_i0 | PRJNA1004255 | 12353 | 183 | 3.021429 | 5.52921507 | Campylobacter jejuni | 197 | Bacteria | Bacteria | 40.4 | 0.0237 | NR | EOH1988375.1 | 197 | g12145 | i0 | 50 | 0.918032786885246 | 56 | 21 | 80.3 | 2 | 2 | 148 | 26 | 81 | EOH1988375.1 hypothetical protein [Campylobacter jejuni] | diamond | 168 | 40.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 30445364 | 30445364 | PRJNA1004255_S_NODE_16433_length_160_cov_4.418803_g16225_i0 | PRJNA1004255 | 16433 | 160 | 4.418803 | 7.0700848 | Moraxella osloensis | 34062 | Bacteria | Bacteria | 105 | 4.92e-27 | NR | WP_065263609.1 | 34062 | g16225 | i0 | 96.2 | 0.99375 | 53 | 2 | 99.4 | 0 | 160 | 2 | 52 | 104 | WP_065263609.1 hypothetical protein [Moraxella osloensis] | diamond | 159 | 105 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 30508421 | 30508421 | PRJNA1004255_S_NODE_7513_length_226_cov_3.437158_g7305_i0 | PRJNA1004255 | 7513 | 226 | 3.437158 | 7.76797708 | Shigella sonnei | 624 | Bacteria | Bacteria | 131 | 7.89e-38 | NR | WP_353763784.1 | 624 | g7305 | i0 | 88.6 | 1.85840707964602 | 70 | 8 | 92.9 | 0 | 221 | 12 | 10 | 79 | WP_353763784.1 hypothetical protein, partial [Shigella sonnei] | diamond | 420 | 132 | 0.992424242424242 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Shigella | Shigella sonnei | ||
| 30816902 | 30816902 | PRJNA1004255_S_NODE_8834_length_212_cov_1.390533_g8626_i0 | PRJNA1004255 | 8834 | 212 | 1.390533 | 2.94792996 | Bacteroidota | 976 | Bacteria | Bacteria | 73.6 | 3.37e-13 | NR | HOD10674.1 | 239 | g8626 | i0 | 46.6 | 4.07547169811321 | 73 | 35 | 97.6 | 2 | 3 | 209 | 288 | 360 | HOD10674.1 DUF3987 domain-containing protein [Flavobacterium sp.] | diamond | 864 | 73.6 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. | |
| 30824319 | 30824319 | PRJNA1004255_S_NODE_5054_length_262_cov_4.068493_g4846_i0 | PRJNA1004255 | 5054 | 262 | 4.068493 | 10.65945166 | Paraflavitalea devenefica | 2716334 | Bacteria | Bacteria | 43.5 | 0.026 | NR | WP_167288051.1 | 2716334 | g4846 | i0 | 37.7 | 0.606870229007634 | 53 | 32 | 59.5 | 1 | 103 | 258 | 248 | 300 | WP_167288051.1 DUF6603 domain-containing protein [Paraflavitalea devenefica] | diamond | 159 | 43.5 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Paraflavitalea | Paraflavitalea devenefica | |
| 30950925 | 30950925 | PRJNA1004255_S_NODE_10734_length_195_cov_3.184211_g10526_i0 | PRJNA1004255 | 10734 | 195 | 3.184211 | 6.20921145 | Enterobacter hormaechei | 158836 | Bacteria | Bacteria | 67.4 | 8.65e-13 | NR | WP_276192107.1 | 158836 | g10526 | i0 | 89.5 | 0.584615384615385 | 38 | 3 | 56.9 | 1 | 3 | 113 | 54 | 91 | WP_276192107.1 hypothetical protein [Enterobacter hormaechei] | diamond | 114 | 67.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacter | Enterobacter hormaechei | ||
| 31139924 | 31139924 | PRJNA1004255_S_NODE_12135_length_184_cov_8.035461_g11927_i0 | PRJNA1004255 | 12135 | 184 | 8.035461 | 14.78524824 | Compostibacter hankyongensis | 1007089 | Bacteria | Bacteria | 116 | 8.37e-30 | NR | WP_344980545.1 | 1007089 | g11927 | i0 | 94.9 | 5.77173913043478 | 59 | 3 | 96.2 | 0 | 7 | 183 | 178 | 236 | WP_344980545.1 ribonucleoside-diphosphate reductase small subunit [Compostibacter hankyongensis] | diamond | 1062 | 116 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Compostibacter | Compostibacter hankyongensis | |
| 31234973 | 31234973 | PRJNA1004255_S_NODE_13195_length_178_cov_1.740741_g12987_i0 | PRJNA1004255 | 13195 | 178 | 1.740741 | 3.09851898 | Xanthobacteraceae bacterium | 2021379 | Bacteria | Bacteria | 111 | 1e-29 | NR | MDR3469815.1 | 2021379 | g12987 | i0 | 78 | 0.99438202247191 | 59 | 13 | 99.4 | 0 | 178 | 2 | 41 | 99 | MDR3469815.1 hypothetical protein [Xanthobacteraceae bacterium] | diamond | 177 | 111 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Xanthobacteraceae | Xanthobacteraceae bacterium | |||
| 31266802 | 31266802 | PRJNA1004255_S_NODE_515_length_578_cov_5.998131_g315_i0 | PRJNA1004255 | 515 | 578 | 5.998131 | 34.66919718 | Shigella sonnei | 624 | Bacteria | Bacteria | 80.9 | 2.32e-16 | NR | WP_353763804.1 | 624 | g315 | i0 | 89.6 | 0.249134948096886 | 48 | 4 | 24.9 | 1 | 63 | 206 | 36 | 82 | WP_353763804.1 hypothetical protein, partial [Shigella sonnei] | diamond | 144 | 80.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Shigella | Shigella sonnei | ||
| 31393444 | 31393444 | PRJNA1004255_S_NODE_4616_length_270_cov_5.740088_g4408_i0 | PRJNA1004255 | 4616 | 270 | 5.740088 | 15.4982376 | Hydrobacter penzbergensis | 1235997 | Bacteria | Bacteria | 137 | 2.78e-35 | NR | WP_092723501.1 | 1235997 | g4408 | i0 | 100 | 0.811111111111111 | 73 | 0 | 81.1 | 0 | 221 | 3 | 1 | 73 | WP_092723501.1 preprotein translocase subunit SecA [Hydrobacter penzbergensis] | diamond | 219 | 137 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Hydrobacter | Hydrobacter penzbergensis | |
| 31488396 | 31488396 | PRJNA1004255_S_NODE_13956_length_173_cov_7.600000_g13748_i0 | PRJNA1004255 | 13956 | 173 | 7.6 | 13.148 | Escherichia coli | 562 | Bacteria | Bacteria | 44.3 | 4.04e-4 | NR | WP_235634694.1 | 562 | g13748 | i0 | 95 | 0.346820809248555 | 20 | 1 | 34.7 | 0 | 3 | 62 | 40 | 59 | WP_235634694.1 hypothetical protein, partial [Escherichia coli] | diamond | 60 | 44.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 31583231 | 31583231 | PRJNA1004255_S_NODE_6276_length_242_cov_3.070352_g6068_i0 | PRJNA1004255 | 6276 | 242 | 3.070352 | 7.43025184 | Candidatus Acidiferrum sp. | 3069120 | Bacteria | Bacteria | 109 | 3.0800000000000004e-27 | NR | HEY2546964.1 | 3069120 | g6068 | i0 | 63.8 | 4.8099173553719 | 80 | 29 | 99.2 | 0 | 240 | 1 | 128 | 207 | HEY2546964.1 GNAT family N-acyltransferase [Candidatus Acidiferrum sp.] | diamond | 1164 | 109 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Candidatus Acidiferrales | Candidatus Acidiferrum | Candidatus Acidiferrum sp. | |||
| 31614651 | 31614651 | PRJNA1004255_S_NODE_5096_length_261_cov_5.380734_g4888_i0 | PRJNA1004255 | 5096 | 261 | 5.380734 | 14.04371574 | Helicobacter pylori | 210 | Bacteria | Bacteria | 87.4 | 4.81e-20 | NR | WP_322538264.1 | 210 | g4888 | i0 | 50 | 1.97701149425287 | 86 | 42 | 97.7 | 1 | 260 | 6 | 15 | 100 | WP_322538264.1 hypothetical protein, partial [Helicobacter pylori] | diamond | 516 | 87.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32089201 | 32089201 | PRJNA1004255_S_NODE_5398_length_256_cov_3.276995_g5190_i0 | PRJNA1004255 | 5398 | 256 | 3.276995 | 8.3891072 | Acidobacteriales bacterium 13_2_2 | 2282142 | Bacteria | Bacteria | 121 | 1.26e-32 | NR | OLB21298.1 | 1803470 | g5190 | i0 | 64.7 | 1.9921875 | 85 | 29 | 98.4 | 1 | 253 | 2 | 44 | 128 | OLB21298.1 MAG: hypothetical protein AUH15_09435 [Acidobacteriales bacterium 13_2_20CM_55_8] | diamond | 510 | 121 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriales bacterium 13_2_20CM_55_8 | ||||
| 32247757 | 32247757 | PRJNA1004255_S_NODE_7738_length_224_cov_1.099448_g7530_i0 | PRJNA1004255 | 7738 | 224 | 1.099448 | 2.46276352 | Escherichia coli | 562 | Bacteria | Bacteria | 101 | 3.01e-26 | NR | WP_369072787.1 | 562 | g7530 | i0 | 90.2 | 0.683035714285714 | 51 | 5 | 68.3 | 0 | 70 | 222 | 1 | 51 | WP_369072787.1 hypothetical protein, partial [Escherichia coli] | diamond | 153 | 101 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 32437523 | 32437523 | PRJNA1004255_S_NODE_1399_length_402_cov_2.793872_g1191_i0 | PRJNA1004255 | 1399 | 402 | 2.793872 | 11.23136544 | Candidatus Acidiferrum sp. | 3069120 | Bacteria | Bacteria | 140 | 4.409999999999999e-37 | NR | HEV3375634.1 | 3069120 | g1191 | i0 | 88.2 | 0.567164179104478 | 76 | 9 | 56.7 | 0 | 3 | 230 | 304 | 379 | HEV3375634.1 vanadium-dependent haloperoxidase [Candidatus Acidiferrum sp.] | diamond | 228 | 140 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Candidatus Acidiferrales | Candidatus Acidiferrum | Candidatus Acidiferrum sp. | |||
| 32469123 | 32469123 | PRJNA1004255_S_NODE_3339_length_301_cov_5.100775_g3131_i0 | PRJNA1004255 | 3339 | 301 | 5.100775 | 15.35333275 | Gammaproteobacteria bacterium | 1913989 | Bacteria | Bacteria | 60.5 | 4.5e-8 | NR | MDB6156549.1 | 1913989 | g3131 | i0 | 49.1 | 0.548172757475083 | 55 | 26 | 52.8 | 1 | 297 | 139 | 930 | 984 | MDB6156549.1 TonB-dependent receptor [Gammaproteobacteria bacterium] | diamond | 165 | 60.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Gammaproteobacteria bacterium | |||||
| 32682135 | 32682135 | PRJNA1004255_S_NODE_17640_length_155_cov_2.232143_g17432_i0 | PRJNA1004255 | 17640 | 155 | 2.232143 | 3.45982165 | Bradyrhizobium | 374 | Bacteria | Bacteria | 48.5 | 1.02e-4 | NR | WP_211985963.1 | 312253 | g17432 | i0 | 56.1 | 1.66451612903226 | 41 | 18 | 79.4 | 0 | 16 | 138 | 606 | 646 | WP_211985963.1 beta strand repeat-containing protein [Bradyrhizobium tropiciagri] | diamond | 258 | 48.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium tropiciagri | ||
| 32839657 | 32839657 | PRJNA1004255_S_NODE_14420_length_171_cov_1.835938_g14212_i0 | PRJNA1004255 | 14420 | 171 | 1.835938 | 3.13945398 | PVC group | 1783257 | Bacteria | Bacteria | 41.2 | 0.0493 | NR | MBI4566026.1 | 2026780 | g14212 | i0 | 52.9 | 1.75438596491228 | 34 | 15 | 59.6 | 1 | 9 | 110 | 200 | 232 | MBI4566026.1 glycosyltransferase [Planctomycetota bacterium] | diamond | 300 | 41.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;