contig_metadata
13 rows where analysis = "diamond", bioproject = "PRJNA1002816" and tax_kingdom = "Bacillati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7805375 | 7805375 | PRJNA1002816_P_NODE_15127_length_279_cov_1.470874_g14967_i0 | PRJNA1002816 | 15127 | 279 | 1.470874 | 4.10373846 | Eubacteriales | 186802 | Bacteria | Bacteria | 125 | 1.5099999999999999e-32 | NR | MCQ2484223.1 | 2044939 | g14967 | i0 | 64.1 | 4.8494623655914 | 92 | 31 | 98.9 | 1 | 277 | 2 | 157 | 246 | MCQ2484223.1 aspartate--ammonia ligase [Clostridia bacterium] | diamond | 1353 | 125 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 11631609 | 11631609 | PRJNA1002816_P_NODE_8630_length_382_cov_1.449838_g8470_i0 | PRJNA1002816 | 8630 | 382 | 1.449838 | 5.53838116 | Microbacteriaceae bacterium | 1873462 | Bacteria | Bacteria | 211 | 8.82e-67 | NR | MBX9718074.1 | 1873462 | g8470 | i0 | 86.2 | 0.910994764397906 | 116 | 16 | 91.1 | 0 | 29 | 376 | 84 | 199 | MBX9718074.1 30S ribosomal protein S17 [Microbacteriaceae bacterium] | diamond | 348 | 211 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacteriaceae bacterium | |||
| 27571570 | 27571570 | PRJNA1002816_P_NODE_13004_length_307_cov_0.987179_g12844_i0 | PRJNA1002816 | 13004 | 307 | 0.987179 | 3.03063953 | Kitasatospora gansuensis | 258050 | Bacteria | Bacteria | 43.5 | 0.0183 | NR | MFD0572961.1 | 258050 | g12844 | i0 | 33.8 | 1.27035830618892 | 65 | 41 | 63.5 | 1 | 306 | 112 | 15 | 77 | MFD0572961.1 hypothetical protein [Kitasatospora gansuensis] | diamond | 390 | 43.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Kitasatospora | Kitasatospora gansuensis | ||
| 27659058 | 27659058 | PRJNA1002816_P_NODE_13644_length_298_cov_1.022222_g13484_i0 | PRJNA1002816 | 13644 | 298 | 1.022222 | 3.04622156 | FCB group | 1783270 | Bacteria | Bacteria | 122 | 3.9999999999999997e-32 | NR | WP_033675763.1 | 574375 | g13484 | i0 | 62.7 | 4.19798657718121 | 83 | 31 | 83.6 | 0 | 9 | 257 | 80 | 162 | WP_033675763.1 type 1 glutamine amidotransferase domain-containing protein [Bacillus gaemokensis] | diamond | 1251 | 123 | 0.991869918699187 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus gaemokensis | ||
| 28265984 | 28265984 | PRJNA1002816_P_NODE_18946_length_247_cov_0.885057_g18786_i0 | PRJNA1002816 | 18946 | 247 | 0.885057 | 2.18609079 | Cyanobacteria bacterium P01_G01_bin.54 | 3023307 | Bacteria | Bacteria | 49.7 | 1.05e-4 | NR | MEM8642542.1 | 3023307 | g18786 | i0 | 32.1 | 0.947368421052632 | 78 | 49 | 89.9 | 4 | 2 | 223 | 83 | 160 | MEM8642542.1 alpha-ketoglutarate-dependent dioxygenase AlkB [Cyanobacteria bacterium P01_G01_bin.54] | diamond | 234 | 49.7 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanobacteria bacterium P01_G01_bin.54 | |||||
| 28360803 | 28360803 | PRJNA1002816_P_NODE_9946_length_354_cov_1.096085_g9786_i0 | PRJNA1002816 | 9946 | 354 | 1.096085 | 3.8801409 | Exiguobacterium aurantiacum | 33987 | Bacteria | Bacteria | 42.4 | 0.0177 | NR | WP_233005565.1 | 33987 | g9786 | i0 | 64.5 | 0.26271186440678 | 31 | 11 | 26.3 | 0 | 247 | 339 | 24 | 54 | WP_233005565.1 hypothetical protein, partial [Exiguobacterium aurantiacum] | diamond | 93 | 42.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Exiguobacterium | Exiguobacterium aurantiacum | |||
| 29497572 | 29497572 | PRJNA1002816_P_NODE_4050_length_564_cov_1.674134_g3890_i0 | PRJNA1002816 | 4050 | 564 | 1.674134 | 9.44211576 | Conexibacter sp. | 1929289 | Bacteria | Bacteria | 46.6 | 0.0222 | NR | HEX5147127.1 | 1929289 | g3890 | i0 | 41.9 | 0.393617021276596 | 74 | 35 | 36.2 | 2 | 245 | 448 | 124 | 195 | HEX5147127.1 hypothetical protein [Conexibacter sp.] | diamond | 222 | 46.6 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Solirubrobacterales | Conexibacteraceae | Conexibacter | Conexibacter sp. | ||
| 29718357 | 29718357 | PRJNA1002816_P_NODE_16930_length_257_cov_1.657609_g16770_i0 | PRJNA1002816 | 16930 | 257 | 1.657609 | 4.26005513 | Mycolicibacterium iranicum | 912594 | Bacteria | Bacteria | 46.6 | 0.00149 | NR | WP_064281344.1 | 912594 | g16770 | i0 | 35.6 | 0.688715953307393 | 59 | 37 | 67.7 | 1 | 49 | 222 | 151 | 209 | WP_064281344.1 GAP family protein [Mycolicibacterium iranicum] | diamond | 177 | 46.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium iranicum | ||
| 29781714 | 29781714 | PRJNA1002816_P_NODE_16411_length_263_cov_2.142105_g16251_i0 | PRJNA1002816 | 16411 | 263 | 2.142105 | 5.63373615 | Streptomyces sp. NBC_ | 1931 | Bacteria | Bacteria | 87 | 1.64e-19 | NR | WP_266814186.1 | 2903864 | g16251 | i0 | 48.2 | 0.96958174904943 | 85 | 44 | 97 | 0 | 257 | 3 | 9 | 93 | WP_266814186.1 hypothetical protein [Streptomyces sp. NBC_01433] | diamond | 255 | 87 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_01433 | ||
| 31583219 | 31583219 | PRJNA1002816_P_NODE_21076_length_233_cov_2.006250_g20916_i0 | PRJNA1002816 | 21076 | 233 | 2.00625 | 4.6745625 | Prescottella equi 1 | 43767 | Bacteria | Bacteria | 46.2 | 0.00188 | NR | CBH47072.1 | 685727 | g20916 | i0 | 39.6 | 0.682403433476395 | 53 | 28 | 68.2 | 1 | 163 | 5 | 1 | 49 | CBH47072.1 putative homoserine O-succinyltransferase [Prescottella equi 103S] | diamond | 159 | 46.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Prescottella | Prescottella equi | ||
| 31994290 | 31994290 | PRJNA1002816_P_NODE_20278_length_243_cov_0.905882_g20118_i0 | PRJNA1002816 | 20278 | 243 | 0.905882 | 2.20129326 | Chloroflexota bacterium | 2026724 | Bacteria | Bacteria | 44.3 | 0.0109 | NR | MBL76554.1 | 2026724 | g20118 | i0 | 34.9 | 1.96296296296296 | 63 | 39 | 77.8 | 1 | 1 | 189 | 106 | 166 | MBL76554.1 septum formation protein Maf [Chloroflexota bacterium] | diamond | 477 | 44.3 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 32437514 | 32437514 | PRJNA1002816_P_NODE_20819_length_241_cov_0.916667_g20659_i0 | PRJNA1002816 | 20819 | 241 | 0.916667 | 2.20916747 | unclassified Streptomyces | 2593676 | Bacteria | Bacteria | 42.4 | 0.00608 | NR | WP_385021696.1 | 2593676 | g20659 | i0 | 61.5 | 0.323651452282158 | 26 | 10 | 32.4 | 0 | 77 | 154 | 1 | 26 | WP_385021696.1 MULTISPECIES: hypothetical protein [unclassified Streptomyces] | diamond | 78 | 42.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | |||
| 32469112 | 32469112 | PRJNA1002816_P_NODE_13419_length_301_cov_0.956140_g13259_i0 | PRJNA1002816 | 13419 | 301 | 0.95614 | 2.8779814 | Nodosilinea sp. PGN35 | 3020489 | Bacteria | Bacteria | 71.6 | 4.88e-12 | NR | WP_275334669.1 | 3020489 | g13259 | i0 | 56 | 0.498338870431894 | 50 | 22 | 49.8 | 0 | 164 | 15 | 365 | 414 | WP_275334669.1 hypothetical protein [Nodosilinea sp. PGN35] | diamond | 150 | 71.6 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nodosilineales | Nodosilineaceae | Nodosilinea | Nodosilinea sp. PGN35 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;