RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA1002570" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1002570 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27002566 27002566 PRJNA1002570_P_NODE_34722_length_254_cov_1.701657_g34527_i0 PRJNA1002570 34722 254 1.701657 4.32220878 Candidatus Algichlamydia australiensis 3341976 Bacteria Bacteria 54.7 2.74e-6   NR MDX8430891.1 3341976 g34527 i0 45.7 0.826771653543307 70 34 82.7 2 44 253 2800 2865 MDX8430891.1 hypothetical protein [Candidatus Algichlamydia australiensis] diamond 210 54.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Candidatus Algichlamydia Candidatus Algichlamydia australiensis
27469550 27469550 PRJNA1002570_P_NODE_22803_length_284_cov_2.127962_g22608_i0 PRJNA1002570 22803 284 2.127962 6.04341208 Waddlia 71666 Bacteria Bacteria 55.5 1.64e-6   NR WP_049767137.1 71667 g22608 i0 38.3 1.98591549295775 94 42 99.3 3 3 284 156 233 WP_049767137.1 BPL-N domain-containing protein [Waddlia chondrophila] diamond 564 55.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Waddliaceae Waddlia Waddlia chondrophila
28613510 28613510 PRJNA1002570_P_NODE_4867_length_492_cov_1.408115_g4673_i0 PRJNA1002570 4867 492 1.408115 6.9279258 Chlamydiales bacterium 2047757 Bacteria Bacteria 92 4.49e-19   NR MFI5343968.1 2047757 g4673 i0 35.2 0.969512195121951 159 95 93.9 3 463 2 35 190 MFI5343968.1 hypothetical protein [Chlamydiales bacterium] diamond 477 92 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
28802673 28802673 PRJNA1002570_P_NODE_26068_length_277_cov_1.509804_g25873_i0 PRJNA1002570 26068 277 1.509804 4.18215708 Chlamydiales bacterium 2047757 Bacteria Bacteria 110 2.86e-27   NR MCC5832150.1 2047757 g25873 i0 55.1 2.90252707581227 89 40 96.4 0 7 273 159 247 MCC5832150.1 MBL fold metallo-hydrolase [Chlamydiales bacterium] diamond 804 110 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29268916 29268916 PRJNA1002570_P_NODE_10409_length_362_cov_3.602076_g10214_i0 PRJNA1002570 10409 362 3.602076 13.03951512 Bacteria 2 Bacteria Bacteria 92.4 5.75e-19   NR WP_284452896.1 83552 g10214 i0 75.5 9.90331491712707 49 12 40.6 0 147 1 7 55 WP_284452896.1 MGH1-like glycoside hydrolase domain-containing protein [Parachlamydia acanthamoebae] diamond 3585 93.2 0.991416309012876 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Parachlamydia Parachlamydia acanthamoebae
29465578 29465578 PRJNA1002570_P_NODE_21210_length_288_cov_1.279070_g21015_i0 PRJNA1002570 21210 288 1.27907 3.6837216 unclassified Neochlamydia 2643326 Bacteria Bacteria 61.6 1.49e-8   NR WP_166157273.1 2643326 g21015 i0 67.5 0.833333333333333 40 13 41.7 0 1 120 631 670 WP_166157273.1 MULTISPECIES: ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent [unclassified Neochlamydia] diamond 240 61.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Neochlamydia  
31139861 31139861 PRJNA1002570_P_NODE_2075_length_759_cov_1.938776_g1895_i0 PRJNA1002570 2075 759 1.938776 14.71530984 Chlamydiota bacterium 2081524 Bacteria Bacteria 101 3.06e-22   NR NDD59405.1 2081524 g1895 i0 39.5 0.656126482213439 119 71 46.6 1 386 739 9 127 NDD59405.1 hypothetical protein [Chlamydiota bacterium] diamond 498 101 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
31772730 31772730 PRJNA1002570_P_NODE_43337_length_242_cov_0.911243_g43142_i0 PRJNA1002570 43337 242 0.911243 2.20520806 Chlamydiales bacterium 2047757 Bacteria Bacteria 47.4 8.27e-4   NR HEX2583292.1 2047757 g43142 i0 44.9 0.607438016528926 49 27 60.7 0 153 7 1 49 HEX2583292.1 hypothetical protein [Chlamydiales bacterium] diamond 147 47.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
32871268 32871268 PRJNA1002570_P_NODE_43020_length_242_cov_1.627219_g42825_i0 PRJNA1002570 43020 242 1.627219 3.93786998 Chlamydiia 204429 Bacteria Bacteria 78.2 1.14e-14   NR WP_068468705.1 1414722 g42825 i0 58.5 4.02892561983471 65 27 80.6 0 239 45 398 462 WP_068468705.1 aminodeoxychorismate synthase component I [Candidatus Protochlamydia phocaeensis] diamond 975 78.6 0.994910941475827 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Candidatus Protochlamydia Candidatus Protochlamydia phocaeensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;