RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1002570" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1002570 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30697813 30697813 PRJNA1002570_P_NODE_22494_length_285_cov_1.452830_g22299_i0 PRJNA1002570 22494 285 1.45283 4.1405655 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 144 2.19e-41   NR MCX6562546.1 2052149 g22299 i0 75.5 0.989473684210526 94 23 98.9 0 283 2 4 97 MCX6562546.1 hydroxyethylthiazole kinase [Candidatus Aminicenantes bacterium] diamond 282 144 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
30824280 30824280 PRJNA1002570_P_NODE_39434_length_247_cov_0.885057_g39239_i0 PRJNA1002570 39434 247 0.885057 2.18609079 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 79.7 3.64e-15   NR MCX6579301.1 2052149 g39239 i0 45.1 0.995951417004049 82 44 99.6 1 1 246 314 394 MCX6579301.1 SPASM domain-containing protein [Candidatus Aminicenantes bacterium] diamond 246 79.7 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;