RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1001940" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 4 ✖

bioproject 1

  • PRJNA1001940 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27128753 27128753 PRJNA1001940_S_NODE_19202_length_443_cov_3.260000_g18166_i0 PRJNA1001940 19202 443 3.26 14.4418 Erythrocytic necrosis virus 1543320 Viruses Viruses 77.8 4.41e-15   NR QCF47477.1 1543320 g18166 i0 50 1.04288939051919 84 40 55.5 1 27 272 44 127 QCF47477.1 putative RNA-dependent DNA polymerase [Erythrocytic necrosis virus] diamond 462 77.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
27413906 27413906 PRJNA1001940_S_NODE_99823_length_217_cov_1.655172_g98769_i0 PRJNA1001940 99823 217 1.655172 3.59172324 Erythrocytic necrosis virus 1543320 Viruses Viruses 42.7 0.0104   NR QCF47480.1 1543320 g98769 i0 95 0.552995391705069 20 1 27.6 0 156 215 21 40 QCF47480.1 putative RNA-dependent DNA polymerase [Erythrocytic necrosis virus] diamond 120 42.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
28171373 28171373 PRJNA1001940_S_NODE_100986_length_216_cov_1.323699_g99932_i0 PRJNA1001940 100986 216 1.323699 2.85918984 Bacteriophage sp. 38018 Viruses Viruses 40.4 0.0334   NR DAI34743.1 38018 g99932 i0 36.2 0.958333333333333 69 39 88.9 2 211 20 4 72 DAI34743.1 MAG TPA: hypothetical protein [Bacteriophage sp.] diamond 207 40.4 1 Viruses               Bacteriophage sp.
29591857 29591857 PRJNA1001940_S_NODE_118090_length_199_cov_3.455128_g117036_i0 PRJNA1001940 118090 199 3.455128 6.87570472 Polycipiviridae sp. 2496155 Viruses Viruses 58.2 7.81e-8   NR XCO48609.1 2496155 g117036 i0 42.1 2.60804020100502 57 33 85.9 0 190 20 1930 1986 XCO48609.1 MAG: putative ORF5 protein, partial [Polycipiviridae sp.] diamond 519 58.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Polycipiviridae   Polycipiviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;