RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1001940" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1001940 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26939282 26939282 PRJNA1001940_S_NODE_209202_length_151_cov_1.777778_g208148_i0 PRJNA1001940 209202 151 1.777778 2.68444478 Encephalitozoon intestinalis 58839 Fungi Fungi 108 5.1100000000000005e-26   NR UTX44803.1 58839 g208148 i0 100 0.973509933774834 49 0 97.4 0 3 149 443 491 UTX44803.1 asparagine synthase [Encephalitozoon intestinalis] diamond 147 108 1 Eukaryota Opisthokonta Fungi Microsporidia     Unikaryonidae Encephalitozoon Encephalitozoon intestinalis
26970954 26970954 PRJNA1001940_S_NODE_139722_length_184_cov_1.021277_g138668_i0 PRJNA1001940 139722 184 1.021277 1.87914968 Encephalitozoon intestinalis 58839 Fungi Fungi 96.7 1.8999999999999998e-24   NR UTX45812.1 58839 g138668 i0 100 0.733695652173913 45 0 73.4 0 2 136 44 88 UTX45812.1 hypothetical protein GPK93_08g13910 [Encephalitozoon intestinalis] diamond 135 96.7 1 Eukaryota Opisthokonta Fungi Microsporidia     Unikaryonidae Encephalitozoon Encephalitozoon intestinalis
30382355 30382355 PRJNA1001940_S_NODE_206853_length_152_cov_0.880734_g205799_i0 PRJNA1001940 206853 152 0.880734 1.33871568 Encephalitozoon intestinalis 58839 Fungi Fungi 106 1.24e-26   NR UTX45704.1 58839 g205799 i0 100 0.986842105263158 50 0 98.7 0 1 150 176 225 UTX45704.1 DUF2463 domain-containing protein [Encephalitozoon intestinalis] diamond 150 106 1 Eukaryota Opisthokonta Fungi Microsporidia     Unikaryonidae Encephalitozoon Encephalitozoon intestinalis
32626605 32626605 PRJNA1001940_S_NODE_170720_length_166_cov_1.560976_g169666_i0 PRJNA1001940 170720 166 1.560976 2.59122016 Encephalitozoon intestinalis 58839 Fungi Fungi 112 4.36e-27   NR UTX44498.1 58839 g169666 i0 100 0.993975903614458 55 0 99.4 0 2 166 470 524 UTX44498.1 DUF1609 domain-containing protein [Encephalitozoon intestinalis] diamond 165 112 1 Eukaryota Opisthokonta Fungi Microsporidia     Unikaryonidae Encephalitozoon Encephalitozoon intestinalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;